Pseudogemmatithrix spongiicola: Strain318_002505
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Entry
Strain318_002505 CDS
T10301
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pspc Pseudogemmatithrix spongiicola
Brite
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_002505
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GFIT
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NCBI-ProteinID:
WKW16095
UniProt:
A0AA49JX23
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Position
2729038..2730570
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AA seq
510 aa
AA seq
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MTRSTRMLAALAALMTAGTSLDAQASGTVDLAGLFRYSQLDERAAAEPGVGFGGRLGIFM
FPNVALEVTHALTTTADTPEARQSPLHLHLARHFRFNDGVAFILGAGWVRDRTNGIQPNG
SLEADGVSAIAGLQMNFTRRLALRVDAVYDHLPVARYDAAGPEAANLHLQAGLSLRFPPP
DRDRDGVLDRVDLCADTPVGATVNAQGCQPDADGDRVPDVADRCANTPAGTPVDASGCPL
DSDGDGVLDTADRCANSPAGQPVDASGCPRDSDGDTVIDIADRCPNTPAGTPVDANGCPR
DADGDNVPDNLDRCPNTPAGTPVNANGCPADEDGDGVLDNADRCSATPAGVRVDANGCPV
PIDADGDGVRDIDDRCPNTPPGTRVDARGCQIVFEEGQRNIVLEGVNFETGRAVLTAESQ
AILDRVAESLVAAPEVNLEVQGHTDNTGSVANNTRISQARADAVRQYLISKGVAANRLTA
RGYGPTQPAASNTTPQGRAQNRRVELRRTN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgctcgactcggatgctcgccgctctcgcggcgctgatgaccgctggcacatcg
ctggacgcccaagcgtccgggacagtggacctcgccggtctcttccggtactcgcagctc
gacgaacgcgctgcggcggaaccgggagtcgggttcggcggacggctcggcatcttcatg
ttcccgaacgtggcgctcgaagtcacccacgcgctcacgaccactgcggacacgccggag
gcgcggcagtcgccgctgcacctgcatctcgcgcggcacttccgcttcaatgacggcgtc
gccttcatcctcggtgccggctgggtgcgcgatcgcaccaacggcatccagcccaacggc
tcgctcgaggccgacggcgtgtccgcgatcgccggcctgcagatgaacttcacgcggcgc
ctcgcgctgcgcgtggacgccgtgtacgaccacttgccggtcgcgcgctacgatgccgcc
ggccccgaggccgcaaatctccacctgcaggccggcctctcgctgcgcttcccgccgccg
gaccgggaccgcgacggcgtgctcgatcgtgtcgacctctgtgcagacaccccggttggc
gcgacggtcaacgcacagggctgccagcccgacgccgatggcgaccgcgtgcccgatgtc
gcggatcgctgcgccaacacgccggccggcacgccggtcgacgccagcggctgcccgctc
gacagcgacggcgacggcgtcctcgacaccgccgaccgctgcgcgaactcgccggcggga
cagccggtcgatgcgagcggctgcccgcgcgattcggacggcgacaccgtcatcgacatc
gccgaccgctgcccgaacacgcccgccggcacgcccgtcgacgccaacggctgcccgcgc
gacgccgacggggacaacgtaccggacaacctcgatcgctgccccaacacgcccgccggt
acgccggtgaacgccaacgggtgccccgccgacgaagacggcgatggcgtgctcgacaac
gccgaccgctgctccgcgacacccgcgggtgtccgcgtggacgccaacggctgtccggtc
ccgatcgacgcggacggcgacggcgtccgggacatcgatgaccgctgcccgaacacgccg
cccggcacgcgcgtcgatgcccgcggctgccagatcgtcttcgaggaaggccaacgcaac
atcgtcctcgaaggcgtgaacttcgagacggggcgcgccgtgctgacggcggagtcgcag
gcgatcctcgatcgcgtggccgaatcgctcgtcgccgcacccgaggtgaacctcgaggtc
caagggcacaccgacaacaccggctcggtggccaacaacacgcgcatctcgcaggcccgc
gccgatgcggtgcggcagtacctcatcagcaagggcgtggcggcgaaccgcctgacggcg
cgtggctacggcccgacgcaaccggcggcctcgaacaccacgccgcagggccgcgcgcag
aaccggcgcgtggagctacgccggacgaactga
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