Pseudogemmatithrix spongiicola: Strain318_002521
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Entry
Strain318_002521 CDS
T10301
Name
(GenBank) Ig-like domain-containing protein
Organism
pspc Pseudogemmatithrix spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_1
MG4
ASH
Motif
Other DBs
NCBI-ProteinID:
WKW16111
UniProt:
A0AA49K1R7
LinkDB
All DBs
Position
2752091..2758651
Genome browser
AA seq
2186 aa
AA seq
DB search
MKPTGRRAAAGIALFALSLLSCGREVTGPDGRRLALLAFAPEFSGPVAVVEGAGDAVPFE
RVRVVLRRSDGSIMKDTTVAFPSTADEVSLALLVPIPQDAPSDGLPLTVAMAYVNAAGDT
VFRGGPNPVVARPVGSPGASNPVTVPVTYEGAGKDAATVTIAPRSGVVVSGTTRAFSATA
FDGQGAPIAGTPFVFESLDPTRATVNPVSGVATWLPVRGTARIVASLPNGLRADTATMTV
ALPASKLVLASGNAQTGAVNTALANPIVLRTLASDDVPVEGVVVTFAVAAGGGALSVTTD
TSDANGEVQTAWTLGGAIGAQGITATATGLTGSPLAIAATAVAGAPARLEITQQAATGVA
GTALAPALLVIARDAFGNAVPAFTENVSVAVAGANPPTLGGTTSRAAVGGTATFNDLVLQ
RAGEFKLVVSSGPLTPDTTTVLQVAAGAAVKLKFVQQPTNAVAGATIAPPVAVRAYDAFN
NVAKGFTGSIGLALLTAPGATLGGTTAVNAVDGVAAFADLSVATSGSAYRLHATSGGLAP
DTSAVFNIAPGAPAQLALILPPPEAVVAGTAFDVQLRVRDAQGNTVPSYSQPIAVAFDAA
PTGASFLSGNSPVVPTDGTAEFSAIAFDKIGVYRLRFSSEALGVVSADIQVTAGVAHALS
IVSGNAQTGEGGTTLAQPLVAKVSDALGNPIAGATITWAVTSGGGSLDLTAVPAPGPGQS
AAVWTLGLGAGPQTVRATADGLAPVDFSATATAATPATMAFVTQPANIVAGDTLPSIKVA
VRNAAGQTIPDFNGSVSLALTGGTAGAALVGVATTEAVAGVATFANLTVNKGGAAYRLVA
SHAPLPTLQSDAFDVAAAPAATLTVLGGGGQSAPVATVLGDSIRVRLTDAFGFPVPGQAV
QFTVTLGGGSASAASVVSDADGRASVRWTTGSVGPQQLRVHVGALEQLVSATAIASGPTT
LFAGVDYTIVRVGGSRSVPLYLTNPSATPVEVTLTVPTEGQPPASWATSTVQFAPGATRV
DATLNGLALGEIVAYVSSSVGEDSIVVTVDSSYVSIAQLYDYWSAAGDTIRTFVRISDPA
PAGGIFITVRSSDTTVALVAPSSGSGVPAEGCFAEYCYGGDIQAAVAAPTVGGIDRLSAP
PADSALVFIPEGGIVGEFAIVLLASTSGCSTVDITAGAAGFASGSTNFVVQSQYLYYYID
YPYASPANGVGEGQVASLTFYLGVEARRDTRVHFESSNPAVLEVDSLVLVPRGSTTYLSV
QPRVIAAAADSAWLRFWVDGGARDSLPVFGTAPKLVVEGNLYNAVGGASYVQIGVGSAKQ
PTQRFRRAAPLTVTVTSTDPGVLMPERSTVELSPDDLTAEMGVRLVGSGSASLVFTAPGH
EPDTVSFTTFTAGLSFDNSYPSLGVGQLLDHPVYVNSTGASGAGARTVTVTSSNPGIVEV
VTPTVALGPNGALVRVRGVAAGSSTLTFSGPQLNSTNLGFTVGPTSLQLFSGGTFPPDGL
ARSVSSVITSAGGVRALADTARAVLRSSNPTVLAVADSQIVWLPRIAAYNYQGRVRPLAP
GTATLWLVRPGVDSVSLPFNVTTYALVPYFPSVVVGEQLQAYFSLSRQGPDTLVQSVSVT
SRQGRVSIHDLPATFGVGEYTINGRFVGESFGTDTLDIVVEGYAPMTQVVYVENTSAAYY
IGEYSSPSVGTVYPYVGNTFSVTGVPGGTVIGKPLRLRVVPRDTSMVEAVQDTIEWAIGG
SYTPARFATLRYKRVGSTIIDIVDIDGVIDGDSVEIYIEPADLYGSLSGYYGSSGFSIGM
HQESDPYELYVQRGIISAEPLWVHLESSNPGLVSVPDSVLIEAENYYAYFPLVSGDTTGS
AVITASAPGYNPWRFEVLVTRAVFELYGYETFTDRGRRVEVYAVDALQQYSHDFRSDVEA
RFTTTTPALIDAQSEPTFILPAGDSYAEVIGPRGVMAGSGRLGVMDARTARFDSVATGWE
QVDVYRARLTPQSDPIRLSAGLRSDASRASFTVATGKDTAVVHLASLNGRFTAPDSAMAV
GDFYYSVSTVGAALAGVVQGRDTLVTTFAGETDSIVVDIGLGILRSAGVDGQSIAVGDSI
LLQVSVLDAMGEVAEAVSDMTLSASVSDTSFAVIKDGVEVYEVTIPAGASSFQFWVQATS
LGNSILTLSHPNFRSYQVRLNSVVRP
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaccggccgccgcgccgccgccggcatcgcgctcttcgcgctctcgctgctg
tcctgcggccgcgaggtgacggggcccgacggccgccgcctcgccctcctcgcattcgcc
cccgagttctccggcccggtcgcggtcgtcgagggcgcgggcgatgccgtgccgttcgaa
cgggtgcgcgtcgtcctccgccgcagcgacggcagcatcatgaaggacaccacggtggcg
ttcccatcgacggccgacgaggtgtcgttggcgctgctggtgccgatcccgcaggatgcg
ccgagcgacgggctgccgctgaccgtggcgatggcctatgtcaacgcagcgggtgatacg
gtattccgcggtgggccgaaccccgtcgtcgctcggccggtgggctcacccggagcttcg
aaccccgtcacggtgccggtcacgtacgagggcgcgggcaaggacgcggcgaccgttacg
attgcgccaaggtccggcgtggtcgtgagcggcacgacgcgcgccttctcggcgacggca
ttcgacgggcaaggcgcgccgatcgccggcacgccgttcgtgttcgagtcgctggatccg
acgcgcgcgacggtgaatccggtgagcggcgtcgcgacctggctgcccgtacgcggcacg
gcgcgcatcgtcgcgtcgctgcccaacggtctccgcgccgacacggcgacgatgaccgtc
gcgctgccggcgtcgaagctcgtcctcgcgagcgggaacgcgcagacgggcgcggtgaac
acggcgctggcgaaccccatcgtgctgcgcacgctggccagcgacgacgtcccggtcgag
ggcgtggtcgtgaccttcgccgtcgccgcgggcggcggcgcgctgagcgtgacgaccgat
acctctgacgccaacggcgaggtgcagaccgcgtggaccttgggtggcgcgatcggcgcc
cagggcatcacggcgacggcgacgggactgaccgggtcgccgttggcaatagcggcgacg
gctgtcgccggcgcaccggcgcgcctcgagatcacccagcaggccgctacgggtgtggcg
ggcacggcgctggcgccggcgctcctggtgatcgcgcgcgatgcgttcggaaacgccgtg
ccggcgttcacggagaacgtgagcgtcgcggtggcgggcgcgaatccgccgaccttgggc
ggtaccacttcacgggccgctgtcggcggcaccgcgaccttcaatgacctcgtgctgcag
cgcgcgggcgagttcaagctcgtcgtgagcagcggccccctgacgccggacaccacgacg
gtgctgcaggtcgccgcgggcgccgccgtcaagctcaagttcgtgcagcagcccacgaac
gccgtcgccggcgcgaccattgcgccgccggtggcggtgcgcgcctacgacgccttcaac
aacgtcgcgaagggattcaccggcagcatcgggctggcactgctcaccgcgcccggcgcg
acgctgggcgggacgaccgcggtcaacgccgttgacggggtggccgccttcgccgacctg
tccgtcgccacgagcggcagcgcgtatcgcctccacgcgacgagcggcggcctcgcgcct
gacaccagcgcggtgttcaacatcgcgccgggcgcgccggcgcagctggcgctcatcctg
ccgccgcccgaggccgtggtggccggtacggcgttcgacgtgcagctgcgcgtgcgcgac
gcccagggcaacacggtcccgagctactcgcagcccattgcggtggccttcgatgcggcg
ccgaccggggccagcttcctctcggggaactcgcccgtcgtcccgacggacggcacggcc
gagttcagcgcgatcgcgttcgacaagatcggcgtgtatcgcctgcgcttctcgagcgag
gcgctcggcgtggtgtcggcggatatccaggtcacggcgggcgtcgcgcatgcactgagc
atcgtgagcggcaacgcgcagacgggtgagggcggcacgacgctcgcgcagccactcgtg
gcgaaggtaagcgatgccttgggcaaccccatcgccggcgcgaccatcacctgggccgtg
acgtcaggcgggggatcgctggacctgacggcggtgcccgcgccgggcccgggccagagc
gccgccgtctggacgttgggacttggcgccggaccgcagactgtgcgcgcgacagcggac
ggcctcgcgcccgtggacttcagcgcgacggcaaccgcggcaacgccagcgacgatggcg
ttcgtcacgcaaccggcgaacatcgtcgcgggcgacacgctgccgtcgatcaaggtcgcg
gtgcgcaacgccgctggccagacgattcccgacttcaacggctcggtctcgcttgcgctt
accggtggcaccgcgggtgctgctctcgtgggcgttgcgaccaccgaagcggtcgcgggc
gtggcgaccttcgcgaacctcacggtgaacaagggtggtgccgcgtaccggctggtcgcg
tcgcacgccccgctccccaccctgcagtcagatgcgttcgacgtcgcggcggctccggcc
gcgacgctgaccgtactcggcggcggcgggcaatcggcgccggtcgccacggtcctcggc
gactccatccgtgtgcgcctgaccgatgcgtttggattccccgtgccggggcaggcggtg
cagttcaccgtgacgctcggcggcggcagcgcatcggcggcctccgtggtgagtgacgcc
gacggccgcgccagcgtgcgctggacgaccggcagcgtggggccgcagcagttgcgcgtg
cacgtcggcgcgctggaacagctcgtgagcgccacggcgatcgcgagcgggccgacgacg
ctgtttgcgggcgtggactacacgattgtgcgcgtcggcggcagccgcagcgtgccgctg
tacctcacgaatccctcggccacgccggttgaggtcaccctgaccgtgccgaccgagggc
cagccacccgcgagctgggcgacgtccaccgtgcagttcgcgcccggcgcgacgcgggtg
gatgccacgctcaacggcttggccctcggcgagatcgtcgcctacgtgagctcgagcgtc
ggcgaggattcgatcgtcgtgaccgtggactcgtcgtacgtctcgattgcgcagctgtac
gactactggagcgccgccggcgacacgatccggaccttcgtgcgcatcagcgaccccgcg
ccggccggcgggatcttcatcaccgtgcgcagctccgatacgaccgtggcgttggtcgcg
ccgagctctggcagcggcgttccggccgaaggctgcttcgccgagtactgctatgggggc
gacatccaggcggcagtcgccgcgccgaccgtcggcggtatcgatcggctgagcgcgccg
ccggccgactcggcactggtcttcattcccgagggagggatcgtcggggagttcgccatc
gtgctgctcgcatcgacgagcggttgctccaccgtggacatcacggcgggggccgccgga
ttcgcgagcgggtccacgaacttcgtggtgcagtcgcagtatctctactactacatcgac
tatccgtacgcgtcgccggcgaacggcgtcggcgaggggcaggtggcgtcgctcacgttc
tacctcggggtcgaggcacggcgcgacacgcgcgtgcacttcgagagcagcaatccggcg
gtcctcgaggtggacagcttggtcctcgtgccgcgtggctcgacgacgtacctctcggtg
cagccgcgcgtcatcgccgctgcggcggactcggcgtggctccgcttctgggtcgatggc
ggcgcgcgcgactccctcccggtgttcggcacggcacccaagctcgtcgtcgaaggcaac
ctgtacaacgcagtgggcggcgcgtcctacgtgcagatcggcgtcggcagtgcgaagcag
ccgacccagcgcttccgccgggcggccccgctgaccgtgacggtcacgtcgaccgatccg
ggcgtgctcatgccggagcgcagcacggtcgagctgtcgcccgacgacctgacggcagag
atgggcgtgcggctcgtcggcagcgggtccgcgtcgctggtgttcacggcaccggggcac
gaacccgataccgtctcgttcacgacgttcacggccggactctccttcgacaactcctac
ccgtcgctcggcgtggggcaactgctcgatcatcccgtgtatgtgaattcgacgggcgcg
tccggcgccggcgcacgcacggtgacggtcacgtcgtcgaacccgggcatcgtcgaagtc
gtgacgcccacggttgcgctcggaccgaacggtgcgctcgtgcgcgtccgcggcgtcgcc
gccggcagctcgacgctgacgttctccggcccgcaactcaactcgacgaacctgggcttc
accgtcggaccgacctcgttgcagctcttcagcggcgggacgttcccgcccgacgggctc
gcccgaagcgtcagttcggtcatcacctcggcgggcggcgtgcgtgccttggccgacacg
gcccgagccgtgctgcgctcgagcaaccccacagtgctcgccgtcgccgactcgcagatc
gtctggctgccccgcatcgccgcgtacaactaccagggtcgcgtgcggcccctcgcgccg
ggcaccgcgacgctctggctcgtccgccccggcgtcgacagcgtcagcctccccttcaac
gtgacgacgtacgccctcgtcccgtacttcccctcggtggtggtgggcgaacagctccag
gcctatttctcgctttcccgccagggtccggacacgctcgtgcaatccgtgtccgtcacg
tcgcgccaaggccgcgtcagcatccacgacctgccggcgacgttcggcgtcggcgaatac
acgatcaatggccgcttcgtcggcgagtcgttcggcaccgacacgctcgacatcgtcgtt
gagggctacgcaccgatgacgcaggtggtgtacgtcgagaacacgtccgccgcgtactac
atcggggagtattcctcgccgtccgtcggcaccgtgtacccgtacgtcgggaacaccttc
agcgtgaccggggtcccgggcggcacggtgatcggcaagccgctgcggctccgcgtcgtc
ccacgtgacacgagcatggtcgaagccgtgcaggacaccatcgagtgggcgatcggcggc
agctacaccccggcgcggttcgccacgctgcgctacaagcgcgtgggcagcacgatcatc
gatatcgtggacatcgacggggtcatcgacggtgacagcgtcgagatctacatcgagccg
gcggatctctacggttcgctgtcgggctactacggcagctcgggcttctccatcggcatg
catcaggagtcggatccgtacgagctctacgtccaacgcggcatcatctccgcggagccg
ctgtgggtccacctcgagtcgtcgaacccgggactcgtctccgtgccggactcagtgctc
atcgaggcggagaactactacgcgtacttcccgctggtatccggcgataccacgggctcg
gcggtcatcaccgcgtcggcacccggctacaacccgtggcgcttcgaggtgctcgtgacg
cgggcggtcttcgagctgtatggctacgagacgttcacggaccgcgggcggagggtcgag
gtctatgccgtcgacgccttgcagcagtattcgcacgacttcaggtcggatgtcgaggca
cgcttcacgacgacgacgcctgcgctgatcgacgcccagagtgagccgacgttcatcttg
ccggccggcgactcgtatgcggaggtgatcgggccgcgcggcgtgatggccggcagcggg
cgcctgggcgtcatggatgcccgcacggcgcgcttcgattccgtcgcgacgggctgggag
caagtcgacgtctaccgcgcacggctgacgccgcagtccgatcccatcaggctcagcgcc
ggattgcgcagcgacgcctcacgcgcgtcgttcaccgtcgccacgggcaaggacacggcc
gtcgtgcacctcgcctcgctgaacgggcgcttcactgcaccggacagcgcgatggcggtc
ggggacttctactactccgtgtccacggtgggcgcggcgctcgccggtgtggtgcagggt
cgcgacaccctcgtcaccacgttcgccggcgagacggactccatcgtggtggacatcggg
ctcggcatcctgcgctcggctggcgtggatggccagtcgattgcggtcggcgactccatc
ctgctgcaggtcagcgtgctggacgcgatgggcgaagtcgccgaagccgtgtccgacatg
acgctgtcggcctcggtcagcgacacgagtttcgccgtgatcaaggatggcgtggaggtc
tacgaggtcacgattcccgccggggcgagttcattccagttctgggtgcaggcgacctcg
ctcggcaactcaatcttgacgctcagtcaccccaacttccggtcgtatcaagtccggctc
aactcggtggtgcggccatga
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