Pseudogemmatithrix spongiicola: Strain318_002603
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Entry
Strain318_002603 CDS
T10301
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00280
Valine, leucine and isoleucine degradation
pspc00650
Butanoate metabolism
pspc00907
Pinene, camphor and geraniol degradation
pspc01100
Metabolic pathways
pspc01120
Microbial metabolism in diverse environments
pspc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Strain318_002603
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Strain318_002603
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Strain318_002603
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Strain318_002603
Enzymes [BR:
pspc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Strain318_002603
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
WKW16193
UniProt:
A0AA49K2K7
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Position
complement(2862419..2863273)
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AA seq
284 aa
AA seq
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MPSRVTIVEVSPRDGLQNEKAVLPVAAKVALVDALSAAGVPVIEVTSFVSPKAIPQLADA
EQVMAAITRRPGARYTVLVPNERGYDRALTTRPDGIVVFGAASETFSQKNINCSVAESIE
RFRPVVARAKANGLQVRGTVSCALGCPYEGDIAPAAVRDVAARLLDLGVDELSIADTIGV
GTPERTRAVFEAVLALTDATRVNAHFHDTYGRALVNLEACLALGVRSIDASAAGLGGCPF
APGATGNVATEAVLAMLAASGYETGVDLAAVQAAGAAVRRLLAP
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccgtgtcaccatcgtcgaggtttcgccccgcgacgggctgcagaacgagaag
gccgtgctgcccgtcgcggccaaggtcgcgctggtagatgcgctcagcgccgccggcgtg
ccggtcatcgaagtgacgagcttcgtgagccccaaggcgattccgcagctggcggacgcc
gagcaggtgatggcggcgatcacgcgccgtccgggcgcgcggtacacggtgttggtgccg
aacgagcgcggatacgaccgcgcgctaaccacacgccccgatggcatcgtggtgttcggc
gcggccagcgaaacgttctcgcagaagaacatcaactgctcggtcgccgaatcgatcgag
cggttccggccggtggtcgcgcgggcgaaggccaacggcctgcaggtgcggggcaccgtg
tcctgcgccctcggctgtccgtacgaaggcgacattgccccggccgcggtgcgcgacgtg
gcggcgcggctactcgatctcggcgtggatgagctgtccatcgccgacaccatcggcgtg
ggcacgcccgagcgtacgcgtgcggtgttcgaggcggtgctggcgctgacggacgccacg
cgcgtgaatgcgcacttccacgacacctacggccgggcgctcgtgaacctcgaggcctgc
ctcgcgcttggcgtgcgcagcatcgatgcgagtgccgcaggcctggggggatgtccgttc
gcgccaggcgcgacggggaacgtcgcgaccgaggcggtgctcgcgatgcttgccgccagc
ggctacgagacgggcgtggatctcgcggcggtgcaggccgcgggcgcggccgttcgccgt
ttgcttgcaccctga
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