Pseudogemmatithrix spongiicola: Strain318_002699
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Entry
Strain318_002699 CDS
T10301
Name
(GenBank) RuBisCO large subunit C-terminal-like domain-containing protein
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00630
Glyoxylate and dicarboxylate metabolism
pspc00710
Carbon fixation by Calvin cycle
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
pspc01120
Microbial metabolism in diverse environments
pspc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Strain318_002699
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Strain318_002699
Enzymes [BR:
pspc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Strain318_002699
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Paralog
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
WKW16288
UniProt:
A0AA49Q807
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All DBs
Position
complement(2965802..2967025)
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AA seq
407 aa
AA seq
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MRPTDIDAFFADRHTLDAAQYLELDYTFECGGDPRAAAAHLCAEQSTAQWQRVGVDEDYR
PRHAAKVIALEAEPIAALSLPVPGAPAGPLHRVRVTVAHPHGNFGPRIPNLLSAVLGEGV
YHVPGVPVIRLDDIRFPDAYLAQFPGPQFGVAGLRQLLDAHDRPIFLGVVKPNIGLTPAA
FAAIAEEAWLGGLDIAKDDEMLADIDWSPLAERAQRMGEARARAERATGARKLYMANVTD
EVSRIRELHDVAVSRGAGALLVNALPVGLSGLRMLREHARVPLFAHFPMVAALTRVPGYG
VHARVLTKLQRLCGADAVIMPGFGDRMMVPEDEVMANVRACLEPMGPIQPALPVPGGSDS
AETLPRVYATIGTRDFGFVCGRGIFGHADGPRGGAASVRAAWTQLAT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgaccgacatcgacgccttcttcgccgaccgccacacgctcgacgccgcacaa
tacctcgagctcgactacaccttcgagtgcggcggcgacccgcgggcggcggcggcacac
ctgtgcgccgagcagtccaccgcgcaatggcagcgcgtcggcgtggacgaggactaccgt
ccgcgccatgccgccaaggtgatcgcccttgaagccgagcccatcgcggcgctgagcctt
cctgtgccgggtgcacccgctggaccgctgcaccgtgtacgcgtgaccgtcgcgcatccg
cacggcaacttcgggccgcgcatcccgaacctgctctcggccgtgctcggcgaaggcgtg
taccacgtgcccggcgtacccgtcatccgactcgatgacatccggtttcccgacgcatat
ctcgcgcagttcccggggccgcaattcggcgtggcgggactgcgccagctgctcgatgcc
cacgaccgcccgatcttcctcggcgtggtgaagccgaacatcggcctcacgccggcggcg
ttcgcggccatcgcggaagaggcgtggcttggcgggctcgacatcgccaaggacgacgag
atgctcgcggacatcgactggtcgccgctcgccgagcgggcgcagcgcatgggggaggcc
cgggcacgcgcggagcgcgcaacgggagcacgcaagctgtacatggcgaacgtcacggac
gaggtctcgcggatccgtgagctgcatgacgtcgcggtgtcgcgcggtgcgggggcgctg
ctggtgaatgcgctgcccgtgggcttgagcggcctgcgtatgcttcgcgagcacgcgcgg
gtgccgctgttcgcgcacttcccgatggtcgcggcgctgacgcgcgtgcccgggtatggg
gtgcatgctcgggtgctcacgaagctgcagcgtctctgcggcgcggatgccgtgatcatg
cccggctttggcgatcgcatgatggtgccagaggacgaggtgatggcgaacgtgcgcgcc
tgtctcgagccgatgggcccgatccaaccggcgcttcccgtgccgggcggcagtgattct
gcggagacgctgccgcgcgtgtatgcgacgatcggtacacgcgacttcggcttcgtgtgc
gggcgcgggatcttcggccatgcggatgggccgcgcggtggcgcggcgagcgtgcgcgcg
gcgtggacgcagctcgcgacatga
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