Pseudogemmatithrix spongiicola: Strain318_002715
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Entry
Strain318_002715 CDS
T10301
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_002715
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_002715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
OMP_b-brl_3
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
WKW16303
UniProt:
A0AA49Q811
LinkDB
All DBs
Position
complement(2981486..2983609)
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AA seq
707 aa
AA seq
DB search
MRRRLVVLLAASCVAAPTLAAQDLPRGRVTSRADGRAVAGAEVLLIGDDTLRVRTDADGR
WVATRRPANARELRVRAMGFVAQSRVPSTGTHDVALVPAALALDQVVVSAARREQKLADA
VATVEVVSRRELERSGASDLAAVLTEQLGIEMQGGHPAGSGAMLQGIGSERVLILLDGQP
LAGRLSGNFDLARIPVGMVERVEVVKGAQSTLYGSEAMGGVINIITRRPSDDGRRVGVSA
SGTMGAQGRMDAAGRVQLVAGDFATSLDVARRTQESAPGIARNEGALAARLDVAATMQWR
PDSARQAELAVLALDERQRWRTGTFYGISDNVQLNARVGGSWTRGAHRISPKLAVSDWDH
TAYTSAFTAPVAGDPGDRQRQQILLGELLYNGAFRRGVSLDAGVQLRTDAIETARVPGGR
RSHTSLEPFAQLEFSPLRGFTLLPGVRMTHSDVWGTHVTPRVAARAQVAPRVTLRASYGD
GFRAPDFKELFLFFQNTNAGYAVQGNPLLQPEHSRNAMLGIEWATAGGYVRGQLFQNTFA
DFIETQIVSAPNEAPVYEYQNRDRGWTRGAEFETGANLVASGRLRGELGASLLQTRDERS
GLELLGRPSRSARIGVQAVLPLALRSSVTLVHTGRTPMQRDDSTGAVGSWRDAFTRVDLR
VARTLPVSGLEFALGADNLFDRRPREWAGFTGRHVYTTLTYTLPGLR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgacggctggtggtgctgttggcggcgtcctgcgtcgccgcgccgacgctcgcg
gcgcaggacctgccgcgcgggcgcgtgacctcgcgcgctgacgggcgcgccgtggcgggc
gccgaggtcctgctgatcggcgatgacacgctgcgcgtgcgcacggatgccgacgggcga
tgggtcgcgacgcggcgcccggcgaatgcgcgagagctgcgcgtgcgcgcgatgggattc
gtcgcgcagtcgcgggtgcccagcaccggcacccacgatgtcgcgctggtgcccgccgca
ttggcgctggaccaggtggtggtgagtgccgcgcgtcgcgaacagaagctggcggacgcc
gtcgcgaccgtcgaagtcgtgagccggcgcgagctcgagcgcagcggagcgtccgatctc
gccgccgtcctcaccgagcaactcggcatcgagatgcagggcggccatcccgccggcagc
ggcgcgatgctgcagggcatcggcagcgagcgcgtgctcatcctgctcgacgggcagccg
ttggcggggcgcctgtccggcaacttcgacctggcgcggatccccgtcgggatggtggag
cgcgtcgaagtagtgaagggcgcgcagtccacgctgtacggcagcgaggcgatgggcggc
gtgatcaacatcatcacgcgccggcccagcgacgacggccgccgcgtgggtgtcagcgcg
agcggcacgatgggcgcgcagggccgcatggatgcagcggggcgcgtgcagctcgtcgcc
ggcgacttcgcgacgtcgctcgacgtggcgcggcgcacgcaggaatcggcgccgggtatc
gcgcgcaacgaaggggcattggcggcccgactcgacgtggcggcgacgatgcagtggcgg
ccggacagcgcgcggcaagccgagctcgcggtgcttgcgctcgacgaacgtcagcgctgg
cgcacgggcaccttctacggcatcagcgacaacgtgcagctcaacgcacgcgtgggcggc
agctggacgcgcggcgcgcaccgcatcagtcccaagctcgcggtctccgactgggatcac
accgcgtacaccagcgccttcacggcgccggtcgcgggcgatcccggcgatcggcagcgc
cagcagatcctgctgggcgagctgctgtataacggcgcgttccgccgcggcgtctcgctg
gacgcgggtgtgcaactgcgcacggacgccatcgagacggcgcgcgtgccgggcggccgg
cgttcgcatacctcgctcgagccgttcgcgcagttggagttctcgccgctgcgcggcttc
acgttgctcccgggcgtccgcatgacgcacagcgacgtgtggggtacacacgtcacgccg
cgcgtcgcggcccgcgcacaggtggcgccgcgcgtcacgctgcgcgcctcgtacggggac
ggattccgcgcaccggacttcaaggagctgttcctgttcttccagaacaccaacgccggc
tatgctgtgcagggcaatccgctgctgcagccggagcattcacgcaacgccatgctcggc
atcgagtgggcgacggccggcggctacgtgcgcggccagctgttccagaacaccttcgcc
gacttcatcgagacgcagatcgtctcggcgcccaacgaggcgccggtgtacgagtaccag
aaccgcgaccgcggatggacgcgcggcgcggagttcgagaccggcgcgaacctcgtggcc
agcggacggctgcgcggcgagctgggcgcttcgctgctgcagacgcgggacgagcgcagc
gggctggagttgctcggccggccgtcgcgctcagcgcgcattggcgtgcaagccgtgctg
ccgcttgcgctgcgcagcagcgtcacgctcgtccacaccggccgcacgccgatgcagcgc
gacgactccaccggcgccgtcggaagctggcgcgacgccttcacccgtgtggacctccgc
gtcgcacggacgctgcccgtgagcggcctcgagttcgcgctcggcgccgacaacctcttc
gaccgccgcccccgcgaatgggcgggattcaccggtcggcatgtgtacacgaccctcacc
tacaccctacccggactccgttga
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