Pseudogemmatithrix spongiicola: Strain318_002802
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Entry
Strain318_002802 CDS
T10301
Name
(GenBank) pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00350
Tyrosine metabolism
pspc00360
Phenylalanine metabolism
pspc00380
Tryptophan metabolism
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Strain318_002802
00360 Phenylalanine metabolism
Strain318_002802
00380 Tryptophan metabolism
Strain318_002802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspc04147
]
Strain318_002802
Enzymes [BR:
pspc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Strain318_002802
4.1.1.105 L-tryptophan decarboxylase
Strain318_002802
Exosome [BR:
pspc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Strain318_002802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
SepSecS
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WKW16387
UniProt:
A0AA49K243
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All DBs
Position
3069563..3071020
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AA seq
485 aa
AA seq
DB search
MSAPPRPAEHGDLPLEEFERHATQLAHWIATYLGSPERYAVLAPVAPGAVAASLPAAMPP
EAESLDAILADLDRVVMPGVTHWNHPGFFAYFANTASVPGILGELVSAALNQVGILWRTS
PVLAEMEQVTTGWLRDAMGLPREWFGMLTDTASTSTLQALAAARERDATLDIRERGMAGR
SDLPALRVYCSDQAHSSVDKAVITLGLGRANCVRIASDGAQRMRVDALRAQVEADVAAGM
RPMAVVATLGTTSSTAVDPIAEIAALCERHGLWLHADAAYGGVLAMLPERRAMFAGLERA
DSLVVNPHKWLFTPMDCSVLWTRHPDVLRRAFSLTPEYLRTREQDVALSYSDYSFQLGRR
FRALKLWFVLRAFGLAGIQARLRFHCALAERAAEWIAAEPGWELLAPVTMSVVCFRHRPT
GVVDEAALERHNAAILERVNASGRVFLSHTKLDGRYTLRIAIGNLRTEERHVAEAWRLLR
EAAQA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcctccccgtcccgccgagcacggcgacctgccgctcgaggagttcgagcga
cacgccacgcagctggcgcattggatcgcgacgtacctcggatctcccgaacgctacgcc
gtcctcgctccggttgcaccgggggccgtcgccgcctcgctgccggcggcgatgccgccc
gaggcggaatcgctcgacgcgatcctcgcggacctcgaccgcgtcgtgatgccgggcgtt
acgcactggaaccatccgggcttcttcgcctacttcgcgaacacggcgtcggtccccggc
atcctcggtgagctggtgagcgccgccctcaaccaggtcggcatcctctggcgcacgtcg
cccgtgctcgccgagatggagcaggtcaccaccggatggctgcgcgacgccatgggcctg
ccgcgcgagtggttcggcatgctcaccgacacggcgagcacgagcaccttgcaggcgctg
gcggcagcgcgcgagcgcgacgcgaccctcgacatccgcgagcgcggcatggcgggccgc
agcgacctgcccgcgctgcgcgtgtactgctcggaccaagcgcactcatcggtcgacaag
gccgtgatcaccctcgggctcggccgcgcgaactgcgtgcgcatcgcaagcgacggcgcg
cagcgcatgcgcgtcgatgcgctgcgcgcgcaggtcgaggccgatgtcgcggccggcatg
cgacctatggccgtggtcgcgacgctcggcacgacctcgagcaccgcggtggatccgatc
gccgagatcgccgcgctctgcgagcgccacggcctgtggctgcacgcggacgcggcgtac
ggcggcgtgctcgcgatgctgccggagcgtcgcgcgatgttcgccgggctggagcgggcg
gattcactcgtcgtgaacccgcacaagtggctgttcacgccgatggactgcagcgtgctg
tggacgcggcatccggacgtgctgcgccgcgcattctcgctgacgccggagtacctgcgc
acgcgcgagcaggacgtggcgctgtcgtactccgactactccttccaactcggccgtcgg
ttccgggccctcaagctctggttcgtgctgcgggccttcgggctcgcgggcatccaggcg
cggctgcgcttccactgtgcgctggccgagcgtgcggcggaatggatcgccgccgagccc
ggctgggagttgctcgcgccggtcacgatgtcggtggtgtgcttccggcaccggccgacg
ggcgtggttgacgaggcggcgctcgagcgccacaacgcggccatcctcgagcgcgtgaac
gccagcgggcgcgtgttcctctcgcacaccaaactcgacgggcgctacacgttgcgcatc
gccatcggcaacctgcgcacggaggagcggcacgtggccgaggcttggcgactgctgcgt
gaggcggcgcaggcatga
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