Psychrobacter sp. P2G3: AK823_00440
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Entry
AK823_00440 CDS
T04386
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pspg
Psychrobacter sp. P2G3
Pathway
pspg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AK823_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspg03019
]
AK823_00440
03016 Transfer RNA biogenesis [BR:
pspg03016
]
AK823_00440
Enzymes [BR:
pspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AK823_00440
Messenger RNA biogenesis [BR:
pspg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AK823_00440
Transfer RNA biogenesis [BR:
pspg03016
]
Prokaryotic type
tRNA degradation factors
AK823_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
S1_RRP5
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
AMN50774
UniProt:
A0A7U5HZL2
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All DBs
Position
97993..100107
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AA seq
704 aa
AA seq
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MFNTIKREFQYGDQKVVLETGRVARQANSIMVHMGGVSVLVAAVVKSDAKEGQNFFPLTV
NYQEKMYAAGKIPGAYGKREGRASEFETLTSRLIDRPIRPLFPEGYVNEIQITATVVSSD
KTQSADIAALIGASAALAISDAPFNGPVAAARVGFINGEYVLNPTLEQLKESDLDLVVAG
TKSAVLMVESEAAELSEDQMLGAVLYGHQQQQIVIDNIASMAEEVGTAKQQYAAPKRDQA
LESSMKEQFGEQVADAYTITDKQERYTKLDEIKQSIIDALAGDAESENYADTVSELKEIY
NDLKYRTVRDNILSGKPRIDGRDLETVRALDVQVGVLPFTHGSALFTRGETQALVTTTLG
NSRDVNMIDSLAGTIRDHFMLHYNFPHFSVGETGREGIPKRREIGHGRLARRGVQAMLPD
SERFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAPVAGIAMGLVKEGERFAV
LSDILGDEDHLGDMDFKVAGSKDGITALQMDIKIEGITPDIMEQALKQAHAGRIHILDAM
NKVLPESRTEINAHAPNYAVIEINPDKIRDVIGKGGAMIRQLTEETGAVIDIDDGGTIRI
FGENKAATKAAIGKIEALTAEVEVGKTYEGTVARIVDFGAFVNVLPNTDGLVHISQIAEE
RVENVSDYLKEGQIVKVFVQDVDNRGRIKLTMKGIEQGTTTTAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatactattaaacgtgaattccaatatggcgaccaaaaagtcgtccttgaaact
ggccgtgttgctcgccaagctaattctattatggtccatatgggcggcgtttcagtgttg
gtggcagcagtagtaaaatctgatgccaaagaaggccaaaacttctttccattgactgta
aactatcaagaaaaaatgtatgctgcgggtaaaatcccaggtgcatatggcaaacgtgaa
ggacgcgccagtgagtttgaaacgttaacgtcgcgtttaattgaccgtccgattcgtccg
ctattccctgaaggctacgttaacgaaattcaaatcactgctactgttgtttcatcagat
aagactcagtctgcagatatcgcagcactaatcggtgcctcagcagcactggctatctct
gacgcgccattcaatggccctgttgctgccgcacgtgttggctttatcaatggtgaatac
gtactaaacccaacgcttgaacaacttaaagaaagtgaccttgatttagttgtagctggt
acaaagtctgccgtattgatggttgaatctgaagcggcagagctttcagaagatcagatg
ctaggcgcggtactatacggtcatcagcaacagcaaattgttattgataacattgcttca
atggcagaagaagttggtactgctaagcagcaatatgctgcccctaaacgtgatcaagcg
cttgaaagcagcatgaaagagcagttcggcgagcaagttgctgatgcttataccattact
gataagcaagagcgttacactaagcttgatgagattaagcaatcaattatcgatgcgctt
gctggtgatgctgagtcagaaaattatgctgatacggtatctgagctaaaagaaatctat
aacgaccttaaatatcgtactgttcgtgacaatatcttgtcaggcaagccgcgtattgat
ggtcgtgatcttgagactgttcgtgctcttgatgtacaagtgggcgtgttgccatttact
catggttcagcactatttactcgcggtgaaactcaagcattagtaacgacaacgcttggt
aacagccgtgacgtcaatatgattgactcattagcgggtactatccgtgatcatttcatg
ctgcattacaactttccgcatttctcagtaggtgagactggccgtgaagggattcctaaa
cgtcgtgaaatcggtcatggtcgtctagcacgtcgcggtgtacaagcgatgctaccagac
agcgaacgcttcccgtatgttatccgcgtagtatcggaaatcactgagtcaaatggttca
tcttctatggcctctgtttgcggtgcaagcttggcattgatggatgcaggcgtaccaatc
aaagcaccagttgctggtattgcgatgggtctggttaaagaaggcgagcgctttgctgta
ctctcggatatcctaggtgatgaagatcatcttggcgatatggactttaaagtcgctggt
tctaaagacggtatcacagccttacagatggatatcaaaatcgaaggtattactccagat
atcatggagcaggcgttaaaacaagctcatgcaggtcgtattcatatcctagacgcgatg
aataaagtattgccagagagccgtactgagatcaacgctcacgcacctaactatgcggtt
atcgaaatcaatcctgataagattcgtgacgtaattggtaaaggcggcgcgatgattcgt
cagctaaccgaagagactggcgcggttatcgatattgatgatggtggcacgattcgtatc
tttggcgaaaacaaagccgcaaccaaagctgctatcggtaaaatcgaagcattaacggct
gaagttgaagtgggtaaaacttacgaaggtacagtcgctcgtatcgttgactttggcgca
ttcgtcaacgtcttgccaaatactgatggcctagtacatatctcacaaatcgcagaagag
cgcgtagagaatgtatcagactatctaaaagaaggtcagattgttaaagtattcgttcaa
gatgtcgataaccgtggtcgcattaagttgactatgaaaggtattgagcagggtacaacg
acaactgctgaataa
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