Psychrobacter sp. P2G3: AK823_04595
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Entry
AK823_04595 CDS
T04386
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
pspg
Psychrobacter sp. P2G3
Pathway
pspg03030
DNA replication
pspg03430
Mismatch repair
pspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK823_04595
03430 Mismatch repair
AK823_04595
03440 Homologous recombination
AK823_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspg03032
]
AK823_04595
03400 DNA repair and recombination proteins [BR:
pspg03400
]
AK823_04595
Enzymes [BR:
pspg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK823_04595
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AK823_04595
DNA replication proteins [BR:
pspg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK823_04595
RNase H
AK823_04595
DNA repair and recombination proteins [BR:
pspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK823_04595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMN50863
LinkDB
All DBs
Position
complement(1075274..1076815)
Genome browser
AA seq
513 aa
AA seq
DB search
MKANTTVAYTDGACKGNPGAGGWGAHLIFSDGRTQDLYGSDKETTNNRMELTGAIKALEY
SPRDLKLEIWTDSSYVKNGITEWIANWKKRGWKTASKKPVANQDLWQQLDELRQARDVDW
HWVKGHAGHAGNEKADELANLGVTSSSEHLSASNSVDSPATINTDIAKKKDKIAANDWLN
DDPLGFNMMDEDFDEELLDESDLDETPDNDDSIPIQVSSKPNNATHPMSTNAMISDDMTV
NETTADSNTLDASAELPKFDGDTSRANPHFRPLLPKPIHRHEPNRQLIMDTETTGLDPLK
GDRIIEVGIVEMIGRKFTGEKLHVYINPQRGMDEEVIRIHGISEAFLTDKPTFDQVAQSL
YEFMDGAEIIAHNATFDMNFLNMEFSKVGMTDFAERVQVTDSLVMAKQQYPGQKNTLDAL
VRRLDVGKQDRTFHGALLDSEILAEVYLAMTGGQVTLAIEEDSQADGGHTAHANFANLAS
LLLESTVDNQANQNWFAGLAEDYPDLKTRLSQW
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcaaatactaccgtcgcttatactgatggtgcttgtaaaggtaatcctggcgct
ggtggttggggcgcacatctgatattcagtgatggacgtacgcaagatttgtacggtagt
gataaagaaaccaccaataatcgtatggagctaacgggcgcaataaaagccctagagtac
agtccacgcgacttgaagcttgagatttggactgactccagctacgttaaaaatggcatt
accgaatggattgccaattggaaaaaacgtggctggaaaactgccagcaaaaagcctgtt
gccaatcaagacttatggcaacaattggatgagcttcgtcaagcacgcgacgttgattgg
cattgggttaaaggtcatgctgggcacgcaggcaacgaaaaagctgatgagctggccaat
ctaggcgtgacttctagtagcgagcatctatctgcatctaactctgtagatagtcctgcc
actattaacactgatattgctaaaaaaaaagataaaatagccgctaatgactggctaaat
gacgatccattaggctttaacatgatggatgaagatttcgatgaagagttattagatgaa
agcgatttagatgaaacgccagataatgatgattcaattcctattcaagtcagcagcaaa
ccgaataatgctacacaccctatgagtaccaatgccatgatatcagatgacatgacagta
aacgagacgacggcagacagcaatacactagacgcatctgcagaattaccaaaattcgat
ggcgataccagtcgtgcgaacccacactttcgtcctttgttacccaagcctatccatcgg
catgaacctaatcgccagctgattatggatacggagactacgggacttgatccactaaaa
ggcgatcgaatcattgaagtcggtatcgttgagatgatcggtcgtaaattcaccggtgaa
aagctgcacgtttatatcaacccgcagcgcggcatggatgaagaagtcatccgtattcac
ggtatctctgaggcctttttgacagataaacctacctttgatcaggttgctcagtcgcta
tatgagttcatggatggtgcagaaatcatcgctcacaacgccacgtttgatatgaacttt
ttaaatatggaatttagcaaagttggtatgacagactttgcggaacgtgttcaagtcacc
gactcattagtaatggcaaagcagcaatatcctgggcaaaagaataccttggatgctttg
gttcgccgattagatgttggtaaacaagatcgtacttttcacggagcattactagattcg
gagattttagcggaagtttatctggcaatgaccggtggacaggtgacgctagcgatcgaa
gaggacagccaagcagatggcgggcataccgctcatgctaattttgctaatttggcatct
ttattgctagagtcaaccgtagataaccaagccaatcaaaattggttcgcaggtttagca
gaagattatcctgatttgaaaaccagactatcgcagtggtaa
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