Psychrobacter sp. P2G3: AK823_07435
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Entry
AK823_07435 CDS
T04386
Name
(GenBank) exonuclease SbcD
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pspg
Psychrobacter sp. P2G3
Brite
KEGG Orthology (KO) [BR:
pspg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspg03400
]
AK823_07435
DNA repair and recombination proteins [BR:
pspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AK823_07435
Archaeal homologous recombinant proteins
AK823_07435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
NTPase_1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMN49726
UniProt:
A0A7U4TK39
LinkDB
All DBs
Position
1803452..1807408
Genome browser
AA seq
1318 aa
AA seq
DB search
MRLIELRLKNLNSLKGEWHIDFSDPAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR
LGDITGSTNEIMTQGTGECSAEVIIEIDAKRYQCYWYQHRAHKKAKGNLLPIKHEISEVK
TGKILEEKKSKTSAYIQDLIGMDFNQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA
IYAKISLNVHEKKRFEEDLLGKLQAGVNSLSLLNLEDEKLLAADLEILNQQQSKQRQTFK
TLSEQLQWLDSVEQLQQNLSTYQTDFAAAQQTQTDFNPEAQRLDVANKALEIDSHFRELS
YSRELVNRLSTEQQDLLSKIPTQQEALAQASTHVNDVNKIEKQATDNLQATLPIIAKTRE
LDAEIKQQSHSLADDNQRKDILVNNTQRLLQEIASHGQTEQETKVQLNSIEKYFSDYQEL
NDLDTDMATFDSSCSRLKALLEDNVSLAADKLAHDNQSSQLQAHFDKLSKQQDADKVLIT
QQREQLASLQQQQAALIKKQSLVSMRGEQEQVDQISGQIAQASFKLQQLSELANQIKKTN
LSLPTLNKELISLEGLIANQQSDIQDAKIKKQEKQEHLNLLQKVAKLEDYIAELEDGSPC
PLCGAHEHPYGKHHPLLDSNNIDDNVEQKQSSTIKQTKTQQTQQQIAELETIIDNLEQAL
STYNIEYATKKETLNNQQQQLVPLHQQSEILHGDIQEYIASLFESKNNYSESIVAIINTL
NNISDDINATITNIDHSLSLLDTAKHDLSGHKQSLKTIVVEYEHLTESAAKLSTAIEADE
KQQQAVSRDINNLTTDIKLNSQKIDGIKDKITANFSELTPLMTTVSSLTHKYPADKYKGH
LNSTTALNAADLSDALMQLHHSFDKQAVIGSADYDRHIEKLRQQRSALNQLKRQFNEQKD
RQQQLTNTLSSLTAQIETKQAQLNNDDTALKELECLIAHKTKAIKQLKQDRNEIFADKNT
DNEETQLRSAVDAAKTKQVVAQRHLDTIQQALEQLKLREEQLATELQSATTTLNTQQSTF
TDLLAESQFVNEAAFVSARLPKEEREALHARRLAIDNALHQAKLQLDSTQQALEQKLAAP
MTDASREIIAGQHQQIQIDTDELSQKIGAIDQKLKDNDSQKGQQAAQLIAIDEQKQKLQV
WQQLHTLIGSADGKKYRTFAQGLTFEVMISHANTQLQKMSDRYLLIHDDSNPLELNVIDN
YQGGDIRSTKNLSGGEGFIISLALALGLSQMASHNIRVDSLFLDEGFGTLDEESLDIALD
TLTSLQQEGKLIGIISHVQALKDRILTQIKVEKLSGGFSQISGRGCRRVVNATDEKAS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgatagaactacgacttaaaaatttgaactccttaaaaggcgaatggcacatt
gattttagtgaccccgcttttctgaatgaagggatttttgccattactgggcagacgggc
gctggcaagaccaccatcttggatgcgatttgcttagcactttatagtcagacgccaaga
ttgggtgatattaccggctcaacgaacgaaatcatgacccaaggtacgggtgaatgctcg
gcagaagttatcatcgagattgatgccaaacgttatcaatgctattggtaccaacatcgc
gctcacaaaaaagccaaaggtaacttattaccgattaagcatgagattagtgaggtcaaa
accggcaagattttagaagagaaaaaatctaagacttccgcctatattcaagaccttatc
ggcatggatttcaatcaatttacccgctccatcatgctcgcacagggcagttttgccgcg
tttttaaagtctgatattggcgatagagccgccattttagagaaaataaccggtactgct
atctatgccaagatatcgttaaacgtccatgagaaaaaacgctttgaggaagatttgctt
ggcaagctacaagcaggcgttaatagcttatcgttattaaatcttgaagatgaaaagtta
ctggcagcagatttagaaatccttaatcaacaacaaagcaagcagcggcaaacctttaaa
accctaagcgagcagctgcagtggctggatagtgtcgagcagctacaacaaaatctatcg
acctatcagaccgattttgcagcagcacagcagacacagacagactttaatccagaagca
cagcgcctagatgttgctaataaagccctagagattgacagccacttccgagagcttagc
tatagccgagagttggtcaatcgacttagcactgaacaacaggatttgctcagcaagatt
ccaacacagcaagaagcgcttgcacaagcctctacccatgtaaacgatgtcaataaaatt
gaaaagcaagccacggataatctgcaagccactctgcctattattgcaaagacacgcgag
ttggatgctgagataaaacagcaatcccattctttagcagatgacaatcaacgtaaagac
atattagtcaataatacgcaaagactactccaggaaatagccagccatggacaaacagag
caagagacgaaggttcaacttaatagtatagaaaagtattttagcgattaccaagagcta
aacgacctcgatacagatatggcgacctttgatagcagctgtagccgattaaaggcgctg
ctagaagataatgtcagcttagcggcggataagcttgcgcatgacaatcaatccagccag
ctacaagctcatttcgataagctctctaagcagcaagatgctgataaagtattgataact
caacagcgcgagcaacttgccagcttacaacagcagcaagccgcacttattaaaaaacaa
tcgcttgttagtatgcgcggcgagcaagagcaagtggatcagatcagcggtcagattgcg
caagcaagctttaagttacagcagctgtctgaacttgctaaccaaatcaaaaagaccaac
ctctcgctacctacgctaaacaaggagttaatatctttagaaggactgattgccaatcag
cagtcagatattcaagatgctaagattaaaaaacaagaaaagcaagagcatctgaattta
ctacaaaaggtcgctaagcttgaagactacatagcagaactagaagatggatcgccctgc
ccgttatgcggcgcgcatgagcatccttatggcaagcatcatccgttattagacagtaat
aatatcgatgacaatgtcgagcaaaaacagtcgtccacaataaaacagactaagacgcaa
caaactcagcagcaaatagctgaactagaaaccattattgataaccttgagcaggcttta
tcaacatacaatatcgaatacgccacaaagaaagagacgcttaacaaccagcaacaacag
ctagtgccactacatcagcaatccgaaatattacatggtgatattcaggagtacatagcc
tcactatttgagtctaaaaacaattactctgaatcgattgtggcgattatcaatactctt
aataatataagcgatgatattaatgcgaccatcacgaatatagatcatagcttatcctta
ttggacaccgccaaacacgatctgagtggacataaacaatctcttaaaaccatagtggtc
gaatatgagcatttaactgaaagtgcggcaaagctcagtactgctatcgaagctgatgaa
aaacagcaacaggcagttagtcgcgatattaataatctaacaactgacatcaagcttaac
tcacaaaaaattgatggaataaaagataagatcactgctaatttctcagaattaacgcct
ctgatgaccaccgtttcatctctaacgcataaatatccagcggataaatataaaggacac
ttaaactcaactacagcgctcaatgcggcagacttatctgacgcacttatgcagctgcat
catagttttgataagcaagcggtaataggcagcgcagattatgaccgtcatattgaaaag
ttgcgtcaacagcgcagtgctttaaaccagctaaaacgccagtttaatgagcagaaagac
cgccagcagcagctaaccaataccttaagcagcttgactgcgcagattgaaaccaagcaa
gcacagctgaacaatgatgacacagcactcaaagagctagaatgcttaattgctcataaa
accaaggccatcaaacaattaaagcaagatagaaacgagatttttgcagataaaaataca
gacaatgaagagactcaattacgcagtgcggttgatgcagctaaaaccaagcaagtagta
gcacaaagacatttagataccatacagcaggctctagagcaattaaaacttagagaggag
cagctagcaacagagctacagtcggcgactaccacactgaatacgcagcaaagcaccttt
acggatttactcgcagagtcacagttcgttaatgaagctgcttttgtgagtgctcgcttg
cctaaagaagagcgcgaagcactacacgcacgtagattggctattgataatgcattgcat
caagctaagttgcagttggacagcactcagcaagcgttagaacaaaaacttgctgcgcct
atgactgatgcaagccgagaaataattgctggccagcatcagcaaatacaaatagatact
gatgagttaagtcaaaaaatcggtgcgattgaccaaaagctcaaggataatgatagccaa
aaagggcaacaagcggcacagcttatagccattgatgagcaaaagcagaaactacaagtt
tggcagcagctacatacgttaatcggttcggctgatggtaaaaaatatcgtacctttgcc
caaggattaacgtttgaggtcatgattagtcatgccaatacgcaactgcaaaaaatgagt
gaccgctatttgctcattcatgatgacagcaatccgcttgagctcaatgtcatcgacaac
tatcaaggcggcgatattcgcagtaccaaaaacctctccggcggtgaaggatttattatc
agtctggccttagcgcttgggctatcacaaatggcgagtcacaacatccgcgtcgattca
ctatttttggacgaaggctttggtacgcttgatgaagagtcgcttgatattgcactcgat
accttaaccagcttacaacaagaaggtaaattgatcggtatcatctcgcacgtacaggcg
ttaaaagatcgtatcctaacccaaataaaggtcgaaaaactgtctggcggctttagccaa
atcagtggtcgaggctgtcgccgagttgtcaatgctaccgatgaaaaagcctcgtaa
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