Psychrobacter sp. P2G3: AK823_09430
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Entry
AK823_09430 CDS
T04386
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pspg
Psychrobacter sp. P2G3
Pathway
pspg03410
Base excision repair
pspg03430
Mismatch repair
pspg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AK823_09430
03430 Mismatch repair
AK823_09430
03440 Homologous recombination
AK823_09430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspg03400
]
AK823_09430
DNA repair and recombination proteins [BR:
pspg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AK823_09430
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AK823_09430
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AK823_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMN50067
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Position
complement(2336035..2337918)
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AA seq
627 aa
AA seq
DB search
MLNLTPRYTSTRIDELPTALQPIAAQSFTLARLYAGRGITVPDELETGLSGLLPAEMLHG
VTEAVRLLDVAIDEGQRILVVGDFDCDGATSTALMMRALTKMGAVVDFLVPDRFKYGYGL
TPEIVELGIETYKPDMIVTVDNGISSHEGVARAQADGIIVIITDHHLTTKETPPAQAVVN
PNQLDCDFTSKALVGVGVAFYVLGRLAKLRREAGKSTVQVSQYLDLVALGTIADVGVLDK
NNRILVHHGLTAIRQGRCCMGILALLEQAGRDPKQLHAQDFGFVLGPRINAAGRMDNMRI
GIECLLTEDWSTAQRLAQELEQLNRTRRHVEGEMRAQADSIVQTLAADDDLENNDLENND
LENSSSNNSNPDANNDGIIPHNSLVKNKPSSNGNRSIILYRDDWHQGVIGIVAGRLKESH
YLPSIVFAPADTERTGDDDAIKGSARSIAGVHIRDAIEQVAERYPELITHFGGHAMAAGL
TIKRSNFEAFVMAFNEVMAEMDDEVFAEQKFTDGPLQAGDFSLWFAEHLANASIWGHGFA
PPIFDGIFEVLSFKVLKDKHLKLSLRYPEVQYPIEAIYFNFDSSAWDYRAEKVHLLFQLD
INEWNGKQSLQLMVKDLALVKETVEVG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatttaaccccccgttataccagcactcgcatcgacgagttgcccactgcgttg
caaccaattgccgctcaatcatttactctggctcgcctgtatgcaggtcgcggtattact
gtgcctgatgagcttgaaactggattgtctggtctactgccagctgagatgctacatggc
gtcaccgaagcagtgcgtctattagacgtggccattgatgaaggtcagcgtatccttgtc
gttggcgactttgactgtgatggcgcgaccagtaccgcgctgatgatgcgtgcgctcacg
aagatgggcgcggtcgttgattttttagtaccagatcgtttcaaatatggctatggtctg
acgccagagattgtcgagttaggtattgagacctacaagccagacatgatagttactgtt
gataatggtatctcaagccatgaaggcgtagcgcgtgcacaggctgacggtattattgtc
attatcactgatcatcaccttacgaccaaagagaccccgcctgctcaagcggtggtcaat
cccaatcagctcgattgtgattttactagtaaggcattggtaggggtcggcgtggcgttt
tatgtacttgggcgtttggcaaaactgcgccgcgaagctggcaagtctaccgtacaagtc
agtcaatatttagacttagtggcgcttgggacaattgcagacgttggcgtactcgataaa
aacaatcgtatcttagttcatcatggtttgaccgctatccgtcaagggcgctgctgtatg
ggcatattggcactgcttgagcaagctggccgtgaccccaagcagttacacgcgcaggac
ttcggctttgttttaggtccacgtatcaatgccgctgggcgtatggataatatgcgtatc
ggtattgaatgtttattgactgaagattggagcaccgcgcagcgtttagcacaggagctt
gaacaacttaatcgtacccgtcgtcatgtagaaggcgagatgcgcgcgcaagctgatagc
atcgtgcaaacattggcggctgatgatgatcttgaaaacaacgatcttgaaaacaacgat
ctggagaatagcagttctaataacagcaatcctgacgcaaacaatgatggaattattcct
cataatagccttgttaaaaacaaacctagcagcaatggcaatcgtagtattattttatat
cgggatgattggcaccaaggtgttatcggtatcgtcgctgggcgcttaaaagagagtcat
tatttgcctagcatcgtctttgcaccagcggatacagagcgtactggagatgatgatgcg
attaaaggttcagcacgatctatcgctggcgtgcatattcgtgatgccattgaacaagtc
gccgagcgttatcctgaattgattactcactttggtggtcatgcgatggcagcaggtttg
actattaaacgtagcaactttgaagcgtttgtgatggcgtttaatgaagtcatggcagag
atggatgatgaggtgttcgccgagcagaaattcaccgatgggccactacaagcaggtgac
tttagcttatggttcgctgagcatttagccaatgccagtatttggggtcatggctttgca
ccgccgatatttgacggcatatttgaggtgctgagctttaaagtcttaaaagacaagcat
ttgaagctatcactgcgttatcctgaggtgcagtatccgattgaggcgatctattttaac
tttgatagcagtgcttgggattaccgcgctgaaaaagtacatttgttatttcagttggac
atcaacgaatggaatggtaaacaaagtttgcagcttatggtaaaagatttagcgctcgtc
aaagagactgtagaagtgggctag
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