Pseudohongiella spirulinae: PS2015_1065
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Entry
PS2015_1065 CDS
T04158
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PS2015_1065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_1065
Enzymes [BR:
pspi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PS2015_1065
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PS2015_1065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
AAA_5
AAA_25
AAA
Mg_chelatase
DO-GTPase1
FtsK_SpoIIIE
NTPase_1
AAA_14
CbiA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ALO45729
UniProt:
A0A0S2KBN9
LinkDB
All DBs
Position
complement(1153651..1155645)
Genome browser
AA seq
664 aa
AA seq
DB search
MTAHPLNNADAMLATLEDWADAGWIRWLDLELARFIHTQTINSQAASPALLLATALCSHQ
NGHGHACLDLAHCLADPHRALSLPPDGKHRQPAVSPAELLAQLNLQDWLRQLENPLLTGA
GEGNTPMVLPPEQSKHLLYLRRYWQYEQAILKQINQRLKQTITLDTAHLRQILDQLFGNT
TDDCDWQKVACAVAAANPFSIITGGPGTGKTTTVVRLLAALTQLHDKPQALRIRLAAPTG
KAAVRLSESISRQLQQLPVSVVIPDEVSTIHRLLGSVPGSRHFRHHAGNPLSADVVVVDE
ASMVDIELMAQLLEALPADCRLILLGDKDQLASVEAGAVLGSLCERADRAHYTRQTAEWL
QQASGQTIPAACRDDDGQSLDQAITMLRYSHRFGQVPGIGALANAVNQQSDSPDDLLQGT
YSELRHLAVTAYNDPGLRRLVLDKTHGYGHYLDVITTQQPAADNSDSQTWNDWAAKVLDA
FARFRLLAAIHSSEWGTEVLNQQISGWLQSAGLEHGTGPTDSEWYSGRAIILTRNDYNLG
LMNGDTGIALPCPDANGNLVLRVAFPVASTEQVRWVSPARLQACQTAFVMTVHKSQGSEF
AHTALVLPDFDSPVLTRELVYTAVTRASERFTLIARDAELMRKAISRRVFRTSGLLRDTR
PIQA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcccacccactgaacaatgccgacgccatgcttgccaccctggaagactgggcg
gatgcgggctggattcgctggctggatctggaactggcgcgttttattcacacccagaca
atcaactcgcaggccgcttctcccgcgctgctgttagcgacagcgctgtgcagccatcag
aatggccatggccacgcttgcctggatcttgcgcattgtctggccgacccgcaccgtgcc
ctgtcgctgccaccggacggcaagcatcgtcagccggcggtatcacctgcagagctattg
gcgcagttaaacctgcaggactggctcaggcaacttgaaaacccgttactgacaggcgcc
ggcgagggcaacacaccgatggtgctgccgcctgagcagtcaaaacacctgctttacctg
cgtcgctactggcagtatgaacaggccatcctgaaacagattaatcaacgcctgaaacaa
acaataacgctggacacagcacaccttcggcaaatacttgaccagcttttcggtaatact
actgatgattgcgactggcaaaaagtcgcctgcgccgttgccgcagccaatccattttcg
atcatcactggcggtccgggcactggtaaaaccaccacggttgtccgtctgctggcggcc
ctgactcagttgcatgacaaaccgcaggccttgcgtatccgactggccgcaccaacgggc
aaagcagctgtccgactgagcgaatccattagcaggcagttgcaacaattgcctgtgagt
gtggtgataccagatgaagtgagcactattcaccgactgctcggatcggtgccgggcagc
cgccattttcgccatcatgccggcaatcctctgtcggctgatgtggttgttgtcgatgaa
gcttcgatggttgatatcgaattgatggcacagctactggaggcgctgcctgctgattgt
cgactgatattactgggtgacaaagaccagctggcatccgtggaagccggggcggtactg
ggcagcctgtgtgaacgcgctgatcgtgcgcactatacaaggcagactgccgaatggtta
caacaggcaagcggccagacaattcctgctgcctgtcgggatgatgacgggcagtctctg
gatcaggcaatcaccatgctgcgttacagccaccgctttggacaggttcccggaatcggc
gcactggccaacgcggtcaatcaacagtcagattcgccagacgatcttctgcagggtacc
tacagcgaactgcgacacctggcggtgacagcttataatgatccgggtctgcggcgtctg
gtgctggacaagacgcatggctatggccactacctcgatgtcatcaccacgcagcagcct
gctgccgataacagcgacagccagacctggaacgactgggccgctaaggtgctggatgcg
tttgcccgttttcggctgttggccgccattcacagttctgagtggggcactgaagtgctc
aatcaacagatctccggctggcttcagagcgccggcctggaacatggaaccggaccaaca
gacagtgaatggtacagcggacgcgcaatcattctgacgcgcaatgactacaacctgggc
ctgatgaacggcgataccggcatcgcactgccctgccccgacgccaacggcaatctggtg
ctgcgggtagccttccccgtcgcctccacagaacaggtcaggtgggtatcaccggcccgg
ctgcaagcctgccagactgcctttgtgatgaccgtgcataaatcacaaggatctgaattc
gcgcacaccgcgctggtgctgcctgacttcgacagccctgtgctgacccgcgagctggtg
tataccgctgtcacccgcgcctcagagcgttttaccttgattgccagggatgcagagctg
atgcgcaaagcgatatctcgccgggtctttcggaccagtgggctgctccgtgacacaaga
cccattcaggcgtga
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