Pseudohongiella spirulinae: PS2015_1395
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Entry
PS2015_1395 CDS
T04158
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03030
DNA replication
pspi03430
Mismatch repair
pspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PS2015_1395
03430 Mismatch repair
PS2015_1395
03440 Homologous recombination
PS2015_1395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspi03032
]
PS2015_1395
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_1395
Enzymes [BR:
pspi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PS2015_1395
DNA replication proteins [BR:
pspi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PS2015_1395
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PS2015_1395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ALO46052
UniProt:
A0A0S2KDA2
LinkDB
All DBs
Position
1542438..1545992
Genome browser
AA seq
1184 aa
AA seq
DB search
MNTPQFVHLHVHTEYSIVDGLVRVKPLISAAAEMGMPAVAVTDQTNLFAMIKFYSGAISA
GIKPICGCDVMLQNPDNPDRPYPMVLLVKDLTGYRNLTRLISRAYTENQGQGVPVIQKSW
LQGMSQGLIALSGGHYGEIGRLLLDGDEQGAAEVLYNSMKLFPDSFYLELQRCGRPGEDA
YIQAVIELSAKHNCPLVATNDVRFLKSDDFEAHEVRVCIHERRTLDDPRRSRHYTEQQYL
RSPSEMAELFSDIPEALENSVVIARRCNLDIELGKPFLPNYPVPAGMTMDEYFRQLSLEG
LEQRLAGDFSVEGMSENEIFAGRKPYLERLEFELDVIIQMGFPGYFLIVMEFIQWAKNND
IPVGPGRGSGAGSIVAYALGITDLDPLKYDLLFERFLNPERVSMPDFDVDFCMEGRDRVI
QHVAELYGKDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLSKAM
EQEPALKEFVDSDEDAQEIMEMAFKLEGITRNVGKHAGGVVIAPTVLTDFSPLYCDENGE
GLVTQFDKNDVETAGLVKFDFLGLRTLTIIDWAVKMINAQEPAHIKQPLDITSIPLDDMQ
VYQLLQRAETTAVFQLESRGMKELIRRLLPSCFEDIVALVALFRPGPLQSGMVDDFINRK
HGRADVAYPHPDLEPVLKNTYGVILYQEQVMQIAQVLANYSLGGADMLRRAMGKKKQEEM
DKQRSIFLEGAAQNGLDPALAGSIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKHHYPA
YFMAAVLSADMQNTDKVVTLIEECRQMGLPIVAPAVNIGAYNFTVNEQGEIVYGLGAIKG
LGEGPVSAIIHAREQGGPFASFLDFCSRVDLRSVNKRALEALIRAGALDCVVDAMPDQAR
AQLMASLQDTVQAAEQSLRNKDAGVLDMFGDISPVADQENTGTLLSARPWSQQQRLREEK
ETLGLYLSGHPIDEFLSELSGLTRDRLVNVKPEREAQWVGGLLVGVRTMRNKRGDLIAFL
TLDDRSARLEVSLFAREYEQYREVLEKDAILLVECQVSADEFSGGLRGRAKQVLNLVQAR
QRFASALELTVQADRLAVDFSRRLADCLRPYCEVFLPVESDSSEPDSDDRADVPRPCQVR
IRYERADVSGWLMLGDQWYVRPEQSLLQELSELCAPGTVTIAYQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccgcaatttgtacacctgcatgttcatacagagtattccattgtggacggg
ctggtcagggtcaagccgctgatatcggctgctgccgaaatgggcatgccagccgtagcg
gtgacggaccagactaatctgtttgccatgatcaagttttacagtggtgctatctcggca
ggtatcaaacccatttgtggctgcgatgtgatgctgcaaaacccggacaaccctgatcga
ccatacccgatggtattgctggttaaagatctgacagggtaccgcaatctcaccaggctc
atttcgcgagcctacactgaaaatcagggacagggtgtacccgtcattcagaagagctgg
ctgcaaggcatgtcgcaagggcttattgcgctttctggcggacattacggcgagattggc
cgattattgctcgatggtgatgagcagggcgctgcagaagtactgtataacagtatgaaa
ctgtttccggatagtttttatcttgagcttcagcgttgtggccgaccaggtgaggatgcg
tatatccaggcggtgattgagttgtccgcgaagcataactgtccactggtagctaccaat
gacgtgagattcctgaagtctgacgactttgaagctcatgaggtgcgagtctgtattcat
gagcgacgcacactggatgatccacgcaggtctcgacattataccgaacaacaatatctg
cggtcgcccagcgaaatggcagagcttttttctgacattccggaggccctggaaaattct
gttgtgattgcccggcggtgtaatctcgacatcgaacttggcaagccgtttttgcctaat
tatcccgtacctgccgggatgaccatggatgaatactttcggcaactgagcctggaaggt
ctggaacagcgtctggcaggcgatttttctgtcgaggggatgtcggagaatgaaatattt
gcagggcgcaagccttatctggaacggctggaatttgaacttgacgttatcatccagatg
ggttttccaggttactttctgattgttatggagttcattcaatgggccaagaataatgat
attcctgttggtccgggcagggggtccggggcgggctcaatcgtcgcctatgcattgggt
atcacggatcttgatcctctgaaatatgatttgctgttcgaacgatttcttaatccggag
cgggtatcaatgcccgacttcgatgtagatttctgcatggaaggccgcgaccgtgtgatt
cagcatgtggctgaattgtatggtaaggatgcggtatctcaaattattacattcggcact
atggctgccaaagccgttgtaagagatgtggcacgagttcaaggaaaatcttatggattg
gcagataaactgtccaaactgattccctttgaggttggtatgactctgagcaaggcgatg
gagcaggagcctgccctgaaagagtttgtagattccgacgaagacgcccaggaaattatg
gagatggccttcaagctggagggtatcacccgcaatgtcggcaaacatgctggtggtgtg
gtgattgctcctacggtgttgaccgatttttcaccgctgtattgtgatgagaacggtgag
ggtctggtcacccagtttgataaaaacgatgttgaaaccgctggtctggtgaagttcgac
tttcttgggttgcgaacgctgactattatcgattgggcggttaagatgataaacgctcag
gagcctgctcacatcaagcaacctctggatattacttctatcccattggatgacatgcag
gtttatcagctattgcagcgagctgagactacggcggtttttcagctcgaatcacgcggg
atgaaagagcttatccggcgactgttgcccagttgtttcgaagatatcgtcgcgcttgtg
gcactgtttcgccctggtccgttgcagtcgggcatggttgatgatttcatcaatcgtaaa
catggtcgggccgatgttgcctatccccatcctgacctggaaccggtgcttaagaacact
tatggcgttattctgtatcaggaacaggtgatgcagattgcgcaggttctggccaattac
agcctgggcggggcggacatgttgcgccgggcaatgggtaaaaagaaacaggaagagatg
gacaagcagcgcagtatctttcttgaaggagctgcgcagaacgggctggatccggccctg
gccggctctatttttgatctgatggaaaaatttgccggctacggttttaacaaatctcac
tctgcggcctatgcgctggtttcctatcagacagcctggttaaaacatcactatccagct
tattttatggcggccgttctgtcggctgatatgcagaataccgacaaggtagtaacgctt
attgaagaatgtcgacagatgggactgcctattgtggcacctgcggtcaacataggggcc
tataattttacggtcaatgagcagggcgaaattgtttatggcctcggagcgatcaaaggg
ctgggtgaaggtccggtaagtgcgattatacatgcccgtgagcagggtggtccatttgca
tcttttcttgatttttgctcccgtgttgaccttcgaagtgtcaacaaacgggcacttgaa
gccctgattcgagcgggcgccctggattgtgttgtagatgctatgcctgatcaggcgcgt
gcacaattgatggcttcattgcaggatactgtgcaggccgccgaacagagtcttcgcaat
aaagacgccggtgtgctggatatgtttggtgatatctcccctgtcgccgatcaggaaaat
accggaactttgttgtcggcccgaccatggagccagcagcaaaggttgcgcgaagaaaaa
gaaaccctgggattgtatctgagtggacatccgattgatgagtttttgtctgagctttca
ggattgaccagagatcgacttgttaatgtaaaaccggagcgcgaagcacagtgggtgggc
ggattgctggtcggggttcgcaccatgcgtaacaagcgcggcgatctaattgctttcttg
actctcgatgacaggagtgcgcgactggaagtgtccttgtttgcacgggaatatgagcag
tatcgagaagttcttgaaaaggacgctatcctgctggtcgaatgtcaggtatcagccgac
gaattcagcggcggcttgcgaggccgtgcgaaacaggtattgaatcttgtgcaggcgaga
cagcgttttgccagtgcgttggagttgacggtgcaggctgatcgcctcgctgtggatttc
agtcgccggcttgccgattgtctgagaccgtattgcgaggtatttctgccagttgagtcg
gattcctctgaaccggattcggacgaccgtgccgatgtgcccagaccctgccaggtgcgc
attcgttacgagagagccgatgtctccggctggctgatgttaggcgatcaatggtatgtc
cgacccgagcagagtctgttgcaggagctcagcgagttgtgtgcaccggggacggtgact
attgcttatcagtag
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integrated database retrieval system
