Pseudohongiella spirulinae: PS2015_1624
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Entry
PS2015_1624 CDS
T04158
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PS2015_1624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_1624
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PS2015_1624
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PS2015_1624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Ies1_helical
Motif
Other DBs
NCBI-ProteinID:
ALO46276
UniProt:
A0A0S2KDW5
LinkDB
All DBs
Position
complement(1786741..1788756)
Genome browser
AA seq
671 aa
AA seq
DB search
MRSRFQPAGDQPDAIRCLIEGLEEGLHAQTLLGVTGSGKTFTIANVIASTQRPALVMAPN
KTLAAQLYGEFSEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINEHIEQMRLSA
TKALLERRDVIVVATVSAIYGLGDPGSYLQMVLHLDRGDRVDQRYILRRLADMQYTRNDM
DLQRATYRVRGDVIDIYPADSDEHAIRVELFDDEIEGLSFFDPLTGEVIRKVPRLTIFPK
SHYVTPREKVMDALELIKLELNERVTQLESNHQLIEAQRLSQRTRFDLEMMSELGYCTGI
ENYSRYLSGRDPGQPPPTLFDYLPPDALVIVDESHVSVPQIGAMYKGDRSRKETLVQYGF
RLPSALDNRPLRFEEWEALTSQLIFVSATPGPYEESRSGQVVRQVVRPTGLVDPAVDIRP
AGTQVDDLLSEIRLVVARQERVLVTVLTKRMAEDLTDYLMDHDVRVRYLHSDIDTVERSE
IIRDLRLGNFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLIQTMGRAARNVH
GRAILYADRITGSMQRAIDESERRRETQIAFNEAHNITPAGVSKTIMDVMEGAYSAGDGS
TRQRKRGKAVAEKIASYGTGAPILSDPKHIAAEITRLEARMLELARNLEFEEAAVLRDQV
HLLKKQLLQAG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcccgtttccagccggccggtgatcaaccagatgccatccgctgtttgattgaa
gggctggaagagggtttgcacgctcagactctgctgggtgtaaccgggtcaggaaagact
ttcaccattgccaacgtgattgccagtacgcaacgtcctgcgctggtcatggcacccaac
aagacattggctgcacagctctatggcgagttttcagaattctttccggacaatgctgtt
gagtattttgtttcttattacgactactaccagcctgaggcctatgtcccttcgtccgat
acctatattgaaaaggacgcgtctataaacgagcacatcgagcagatgcgtttgtcggct
accaaggccctgcttgagcgacgcgatgtcatcgtggtggcaacggtatcggccatctac
ggtctgggagatcccggctcatatctgcaaatggtgctgcatctggatcggggtgatcgg
gttgatcagcgatacattctgcgccgactggcagatatgcagtacacccgcaatgacatg
gatctgcagcgagccacttatcgtgttcgtggcgatgtgatcgatatttatccggccgat
tctgatgagcatgccattcgtgtagagttgttcgatgatgagattgagggtctgtctttt
tttgatccgcttaccggagaagtgatccgcaaagtgccgcgtctcacaatatttcccaaa
tcacactacgtgacgccgcgcgagaaagtcatggacgcgctggaattgatcaagctggag
cttaatgaacgggttacacagcttgaaagcaatcatcaactgattgaagcccagcgattg
tcccagcgcacccgctttgatctggagatgatgagcgaactgggctattgcactggcata
gaaaattactccaggtacctgtctggtcgcgatccgggccagccgccacccacgctgttt
gattatctgcctccggatgctctggttattgttgatgaatcacatgtctccgtaccgcaa
atcggtgctatgtataaaggagatcgttcacgtaaagaaaccctggttcagtatggcttt
cgactgccatctgccctggataatcggccgctgcgctttgaggaatgggaggcactgacc
tcacaattgatttttgtgtcggcaactcccgggccctatgaagagagtcgttcgggtcag
gttgtgcggcaggtggtacgccccactggtctggttgatccggctgtagatattcgaccg
gctggcacgcaggtggacgatctgttgtcagaaatcaggttggtggtggccaggcaggag
cgggttctggtgactgtgctcaccaagcgcatggccgaagatctgacggattatctgatg
gatcatgacgtacgggtacgctacctgcattcggatatcgatacggtggagcgatcggaa
atcattcgtgatctgcggctggggaattttgatgtgctggtaggtattaacctgttgcgg
gaaggtctggacattcctgaagtgtcactggtggccattcttgatgccgacaaggagggt
ttcctgcgttctgaccgttcactgatccagaccatggggcgagctgcgcgcaatgtgcat
ggacgtgccattctttatgcagatcgcataaccggttccatgcaacgagcgattgacgag
tcggagaggcggcgcgagacacagattgcatttaatgaagcgcataacattacgccggcc
ggggtcagcaaaaccattatggacgtcatggaaggcgcttactccgctggagatggctcg
acacgccagcgcaagcgtggcaaagcggtggcggagaagattgccagctatggcactggc
gcgcccatattgtcagatcccaaacacattgccgctgaaatcacccgtcttgaggctcgc
atgctggagcttgcccgtaatctggagttcgaggaagccgccgtgctgcgcgatcaggtg
catctgttgaagaaacagctgttgcaggctgggtaa
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