Pseudohongiella spirulinae: PS2015_1631
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Entry
PS2015_1631 CDS
T04158
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pspi
Pseudohongiella spirulinae
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspi03032
]
PS2015_1631
03036 Chromosome and associated proteins [BR:
pspi03036
]
PS2015_1631
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_1631
DNA replication proteins [BR:
pspi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PS2015_1631
Chromosome and associated proteins [BR:
pspi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PS2015_1631
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PS2015_1631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ALO46283
UniProt:
A0A0S2KDA0
LinkDB
All DBs
Position
complement(1794511..1794801)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIERIAAKQAQLSAKDCEFAVKAIIEYMSEALSDGGRIEIRGFGSFSLHYRVPRI
GRNPKTGTPVSLSGKYVPHFKPGKELRDRVNSTMQQ
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaacttatcgagagaattgcagcaaaacaggcacagctttcagctaaa
gactgtgaatttgcggtaaaagcgattatcgagtacatgtcagaggctttgtctgatggt
ggtcgcattgaaatccggggttttggcagcttttcactgcactaccgggtgccgagaatc
gggcgcaacccgaagaccggcaccccggtcagcctgagtggaaagtatgttccgcatttc
aagccaggcaaggagctacgcgatcgtgtcaacagcacgatgcagcagtaa
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integrated database retrieval system
