Pseudohongiella spirulinae: PS2015_2846
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Entry
PS2015_2846 CDS
T04158
Name
(GenBank) Metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PS2015_2846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspi03019
]
PS2015_2846
Messenger RNA biogenesis [BR:
pspi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PS2015_2846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALO47476
UniProt:
A0A0S2KHH5
LinkDB
All DBs
Position
complement(3118942..3120300)
Genome browser
AA seq
452 aa
AA seq
DB search
MTPTDKDFWFVPLGGCGEIGMNLNLYGHADQWLMIDCGVTFEKAPNGGNRVEMPDPLFIA
NRSERLLGLIATHAHEDHIGAIAHLWGQLRCPVYATPFTRQVLLRKLRQLGVDAPVYTIN
PGDTLSLGEFTVRLLPITHSTPETCALFIETPVGRVLHTADWKLDPAPVSGPAIDPGLFR
SLARQGIDSIVCDSTNAPQAGHSLSEAELFEDLLKLVRSSSGRVVVSCFASNIARLQTLG
YVAHMAGRHLGLLGRSLHNMTQCARAAGYLQEHFRPVSTFELGYLPRHEILLVATGSQGE
SGAALQRMAAGNHPDMQLEPGDMVIFSAKTIPGNEVEVARLIQTLKAMQVQVVHADESDL
ALHASGHPYADELAEMYRWVLPRIAIPVHGEPRHMRCNAKIAKAAGVPFQLEGRNGDCFD
LLNATVKRTAVPTGRLWLDERKRELNKVEEIC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaactgataaagatttctggttcgtgccgctgggcggttgtggcgaaatcggc
atgaacctgaatctttacggtcatgccgatcagtggctgatgattgattgcggagtgact
ttcgagaaagctcccaacggcggtaatcgagtggaaatgccggatccgttgttcatcgcc
aatcgctccgagcgcctccttggcctgatagccacccatgctcatgaagatcacataggt
gccattgcgcatctgtgggggcaattgcgctgcccggtctacgccacgccgttcacgcgt
caggtgctgcttcgaaaattgcgtcagctgggtgttgatgcgccagtctacacgatcaat
ccaggcgacactctgtcgctgggcgaatttacggtgcgattgctgcctatcacccattca
actccagagacctgcgctctgtttattgaaacgccggtcggtcgtgtgctgcatacggca
gactggaaactggatcctgcgccggtgtctggcccggcgatcgatcccgggctcttcaga
agtctggccaggcagggcatagacagcattgtctgtgactcaacgaatgcccctcaagcc
ggccactcactgtccgaggccgagctgtttgaagacttgctgaagctggtcagatcgagc
agtggccgagtggtagtttcctgctttgccagcaatattgcgaggctgcaaaccctgggt
tatgtggctcacatggctgggcggcatttgggtttgttgggccgctccctgcataatatg
acgcagtgcgcccgggcagcagggtatttgcaggaacattttcgaccggtttcgaccttt
gagctgggttatctgccgcgccacgaaattctgttggtcgccacgggaagtcagggtgaa
agtggtgcggctttacagcgtatggctgctggcaatcatccggatatgcaactggaacca
ggtgatatggtgatattcagcgccaagaccattccaggcaatgaggttgaggtggcgcgc
ctgatacagacactgaaagccatgcaggttcaggttgtgcatgccgatgagagtgatctg
gcattgcatgcctccggtcatccttatgcagatgagctggcagaaatgtatcgctgggtc
ttacccaggattgccatacctgtgcatggcgagcccagacatatgcgttgcaatgcaaaa
atcgccaaggcagctggcgtacccttccagctggaggggcgcaatggtgattgttttgac
ctgcttaatgcgacagttaaaagaacggcggttccgaccgggcgactatggttggatgag
agaaaacgagaactaaacaaggtggaagagatatgttga
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