Pseudohongiella spirulinae: PS2015_290
Help
Entry
PS2015_290 CDS
T04158
Name
(GenBank) AMP-binding enzyme, putative
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi00061
Fatty acid biosynthesis
pspi00071
Fatty acid degradation
pspi01100
Metabolic pathways
pspi01212
Fatty acid metabolism
pspi02024
Quorum sensing
pspi04146
Peroxisome
Module
pspi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PS2015_290
00071 Fatty acid degradation
PS2015_290
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PS2015_290
09145 Cellular community - prokaryotes
02024 Quorum sensing
PS2015_290
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspi01004
]
PS2015_290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspi04147
]
PS2015_290
Enzymes [BR:
pspi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PS2015_290
Lipid biosynthesis proteins [BR:
pspi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PS2015_290
Exosome [BR:
pspi04147
]
Exosomal proteins
Exosomal proteins of breast milk
PS2015_290
Exosomal proteins of breast cancer cells
PS2015_290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
KOW7_SPT5
Motif
Other DBs
NCBI-ProteinID:
ALO44982
UniProt:
A0A0S2K9H4
LinkDB
All DBs
Position
complement(268226..270049)
Genome browser
AA seq
607 aa
AA seq
DB search
MNMTDSTITDSTIIDGCDTVVKLWRTQCLARGNRVAHREKDLGIWQSHSWQDYYQRARGI
GVALLSLGLQRGQVASILSEDNKEWLYCDLGICGAGGISNGIYTTDSAEQLAYLINDSES
VFLFVENDEQLDKYLTIRDRVPSLKKVIVFERKGLRDFNDPMVMFLDELYQLGDTSDADD
IFSAAIELSQPDDVRMLIYTSGTTGAPKGAMITHRNVMFQLHALQDMLDVTPQDEQLCFL
PLCHILERLISVEIPIHKGSTVNFAESPETVFDNLREVSPHTFTAVPRLWEKMYSSLSNR
RSDATAFGRWAFDRAVAAGHAFKATDTPSLLTRLQFHIWNLLVLRNVRDMIGMANIRRAT
TGAAPISPDLIRWFQAIGVPLYEGYGMTESSGVISLNTHQRQQIGTVGHAIPGTDIKISD
AGEICIRGGNVFAGYWRKPEKTAEDIRDGWLHTGDTGRLVDGMLVITGRIKDIIITAGGK
NITPAEIESRLKFSQYISDAVVIGDKRKYLTCLIMIDQENVEKFAQDNQVAFSDFTSLCR
TDDVIALIDSVIRETNQAFAQVEQIKYFRLIDVLLTAEDEELTATMKLKRSLVEKKHNDL
IDSMYQD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaccgactctaccatcactgactctaccattattgacggctgcgataccgtt
gttaaactctggcgcacgcagtgcctggctcgtggcaaccgtgttgcccaccgcgaaaaa
gatctgggcatctggcagagccacagctggcaggattattatcagcgtgcccggggcatt
ggtgtagccttgttgtcgctaggcctgcagcgcggtcaggtagcctctattctcagtgaa
gacaacaaggagtggctgtactgcgacctgggtatttgcggcgctggtggcatcagcaat
ggcatctacaccacagacagcgccgagcagctggcctatctgattaacgatagcgaatcc
gtgtttctgtttgttgagaacgacgaacaactggataaatacctgaccatacgtgaccgg
gtaccgtcgctgaaaaaagtcatcgtgtttgaacgcaagggcctgcgcgattttaatgac
cccatggtgatgtttctggatgaactttaccaactgggggacacatctgacgcagacgat
atcttcagcgccgccatcgaactctctcagcccgacgatgtgcggatgctcatttacaca
tcagggacaactggcgcccccaaaggcgccatgatcacgcatcgaaacgtcatgttccag
ttgcacgccctgcaggacatgctggatgtcacgccgcaggacgagcaactgtgttttctg
ccgctgtgtcacatcctggagcggctgatctcggtcgagattcccattcacaagggcagc
accgtcaacttcgcagaaagcccggaaaccgtgtttgataacctgcgcgaagtgtcaccg
cacacgtttaccgccgtgccaagactctgggaaaaaatgtacagcagcctgagcaaccgg
cgcagcgatgcgaccgcctttggccgctgggcatttgatcgtgccgtcgctgcgggccat
gccttcaaagccactgacacaccgtctctgctgacccgcctgcagtttcatatctggaat
ctgctggttctgcgcaatgttcgcgacatgattggcatggccaatatacgccgcgccaca
accggcgcagcccccatttcacccgatcttatccgctggtttcaggccatcggggtgcca
ctgtacgaaggttacggcatgaccgaaagctccggtgtcatctccctgaacacacaccag
cgccagcagattggcacagtcggccatgccattcccggtaccgatataaaaatttccgac
gccggagaaatctgcattcgtggcggcaatgtctttgccggctactggcgcaaacctgaa
aaaacggcggaggatattcgcgacggctggctgcacaccggtgacaccggtcgccttgta
gatggcatgctggtcatcaccgggcgcatcaaggacatcatcatcaccgcgggtggcaaa
aatattacaccggcagaaatcgaaagccggcttaagttttcccaatacatttccgatgcc
gtggtgattggtgataaacgcaagtatctgacctgtctgatcatgattgaccaggagaac
gtcgaaaaatttgcgcaggacaatcaggttgcgttttcggacttcacctcgctgtgtcgc
actgatgatgtgattgccctgatcgacagcgtcatccgcgaaaccaatcaggcctttgcc
caggtcgaacagattaaatacttcagactgattgatgtattgctgacagccgaggatgaa
gagctaacggcaaccatgaaactgaaacgatcattggtggaaaagaaacacaatgatctg
atcgactcaatgtatcaggattag
DBGET
integrated database retrieval system