Pseudohongiella spirulinae: PS2015_2961
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Entry
PS2015_2961 CDS
T04158
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pspi
Pseudohongiella spirulinae
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspi03021
]
PS2015_2961
Transcription machinery [BR:
pspi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PS2015_2961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
ALO47588
UniProt:
A0A0S2KHT0
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All DBs
Position
3235576..3236451
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AA seq
291 aa
AA seq
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MGPENMTTGRSLQLVGPAVPGRDLTAYIASVNSIPVLSAEEERELANQYYYENNLEAARQ
LVMAHLRFVVHLARSYSGYGLSQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAE
MHEFILRNWRIVKIATTKAQRKLFFNLRSAKKSLGWLSNDEAQAVAEDLGVDATVVRQME
GRMSAYDKAFDAPTEADDDEAYQSPAYYLEDSSSDMAREIEDAEWEEQQTSNLHKAMSEL
DERSRDIITSRWLTDQKATLHELAAKYNVSAERIRQLEQNAMNKVRGVLTA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagagaatatgacgacaggacgaagtttacaactggtcggcccggccgtaccg
ggtcgtgatctgacggcgtatatcgcctcggtcaacagcattccggtactcagcgcagag
gaagagcgcgagctggccaaccaatactattacgaaaataatcttgaagcggcgcgccag
ctggttatggcgcacctgcgctttgttgtgcacctggcccgcagctactcgggttacggt
ctgtcgcaggcagacctgattcaggaaggtaacgtcggtctgatgaaggccgtcaagcgc
ttcaatccggagatgggcgtgcgtctggtgtcttttgccgtgcactggatcaaggcagaa
atgcacgagtttatcctgcgcaactggcgtatcgtaaaaatcgccaccaccaaagcgcag
cgcaagctgttcttcaacctgcgcagtgccaaaaagagcctgggctggctgagtaacgac
gaagcacaggcggtcgccgaagatcttggtgtggatgcaaccgttgtccgccagatggaa
ggacgcatgagcgcctatgacaaggccttcgatgcacccaccgaagcggacgatgacgaa
gcctatcaatcaccggcctactacctggaagacagttcctccgatatggcccgggaaatt
gaagacgccgagtgggaagagcagcagaccagcaacctgcacaaggccatgagcgaactg
gatgagcgcagtcgcgatatcatcaccagccgctggctgaccgatcagaaagccacgctg
catgaactggctgccaagtacaatgtatcagctgaacggatacgccagctggagcagaat
gccatgaacaaggtgcgtggcgtactgaccgcctga
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