Pseudohongiella spirulinae: PS2015_39
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Entry
PS2015_39 CDS
T04158
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03030
DNA replication
pspi03410
Base excision repair
pspi03420
Nucleotide excision repair
pspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PS2015_39
03410 Base excision repair
PS2015_39
03420 Nucleotide excision repair
PS2015_39
03440 Homologous recombination
PS2015_39
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspi03032
]
PS2015_39
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_39
Enzymes [BR:
pspi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PS2015_39
DNA replication proteins [BR:
pspi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PS2015_39
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PS2015_39
NER (nucleotide excision repair)
GGR (global genome repair) factors
PS2015_39
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Nnf1
HHH
Motif
Other DBs
NCBI-ProteinID:
ALO44737
UniProt:
A0A0S2K8S9
LinkDB
All DBs
Position
40594..43368
Genome browser
AA seq
924 aa
AA seq
DB search
MSADSPLILIDGSSYLFRAFHALPPLVNSKGQPTGAIKGVISMIRSLQKSHPDSPIAVVF
DAKGETFRNKVYADYKAHRPPMPDELRSQIEPIHHIITAMGLPLLVVPDVEADDVIGTLA
AQATAQQRDTLVSTGDKDLAQLVSDHVVLINTMTGERLDPPGVQKKFSLPPERIIDFLAL
TGDKVDNIPGVPGVGPKTAIKWLQEYDSVEGVIANADEIGGKIGEKLRDNIDQLRLSFEL
ATIKLDVDLDVTIKELIPESPDREQLLALFTEFEFKSWIKELEADGIEVSVEQMAAMRDN
LGIEEVEEAAQTDLSSLDLDTDQKDFTLVDSLDVLQKVAGDAKKASLLAIDVLDSGEHYM
QATIIGMALSWASGQAVYIPLAHDGLESSGALDRRRCLEFLKPLMEDPGVHKAAHDTKRL
THLLQNHDIHVDGWRFDTHLASYVLNSVASNHSLEDVSHYYLQKSLEKLDALIGSGRQKL
ALSQTSAQDAMQWLAPRVDMALRLAHQLRSQLESTGELWGLYRYYELALSPVLQRMERTG
IAVDPQRLHEQSRALSARLKELEEQVYSAAGETFNLGSPKQLQAILYDKLNLPVLKKTPK
GQPSTAEAVLQELALDYELPGMIMEHRGLSKLKSTYTEKLPLQINAGTGRIHSTFQQAVA
ATGRLSSTDPNLQNIPIRSVEGRKIRQAFVAAPGYKLLAADYSQVELRIMAHLSQDKGLV
TAFANAQDVHRATASEVFGVALDEVTAEQRRRAKAINFGLIYGMSAFGLARQLGIERHDA
QQYVDRYFERYPGVQDYMERTRELAESQGYVETLFGRRLYLPDIKAGNGMLRKAAQRTAI
NAPMQGTAADIIKQAMVDIDHWLQTGVLDARLVLQVHDELIFEVSDNDVPLLSDGVRFRM
ASAASLDVPLVVDIGVGDNWDQAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggacagccccctaatcctcattgacggatcttcgtatctgttcagagccttc
cacgccctgccgccgctggttaacagcaaaggtcaaccgacaggtgccatcaagggcgtg
ataagcatgattcgcagcctgcagaaatcacaccccgatagccctatagccgttgtgttt
gatgccaagggtgaaacatttcgcaataaggtttacgccgactataaagcgcatcggcca
cccatgccggatgaactgcgcagtcagatagaacccatacaccatatcatcacggccatg
gggttgccgctgctggtggtgccagacgttgaggccgacgatgtgattggcacactggcc
gcgcaggccacggcgcagcagcgcgataccctggtgtcgacaggagataaagatcttgcg
cagttagtaagtgatcacgtcgtgctcatcaacacgatgaccggagagcgcctggacccg
ccgggggtacagaaaaaattcagcttgccgcccgagcgcatcatcgatttcctggcgctt
accggggacaaggtcgacaatattccgggtgtaccgggtgttggccccaagacggcgata
aagtggctgcaggaatatgactcagtggaaggtgtcattgccaacgccgacgagatcggc
ggcaagatcggtgaaaagctgcgcgataatattgatcagctcagactttctttcgaactg
gccaccatcaagctggatgtggacctggacgtgacgatcaaagagctgataccggaatct
cccgaccgcgagcagttgcttgccctgttcacagaatttgaattcaaatcctggatcaag
gagctggaagccgacggaattgaagtaagcgtcgaacagatggccgccatgcgtgacaat
cttggtattgaggaggttgaagaggctgcgcaaacagacctgtcgtccctggatctggat
acagatcagaaggactttacgcttgttgatagtctggatgtgctgcaaaaagtcgctggc
gatgcaaaaaaggcgtctttgctggccattgatgtcctggatagtggcgaacattatatg
caggccaccatcatcggtatggcgctgagctgggcttcgggccaggctgtatatattcct
ttggcgcatgatggtctggagtcctccggcgcgctggatcgccgccgctgtctggagttt
ctgaaacctttaatggaagatcctggcgtccacaaggcagcgcatgacaccaagcgtctg
acccacctgttacagaatcatgatattcatgttgatggctggcgtttcgatacgcatctg
gcgtcctacgtactgaattctgtggccagcaatcattcacttgaagatgtcagccactac
tatctccagaaatcgctggaaaaactggatgcactgattggcagtggccgacagaaactg
gctctcagtcagacttcggcccaggatgccatgcagtggctggcaccacgggtggacatg
gccctgcgtctggcccatcagttacgcagtcagctggagtctaccggcgaactctggggc
ctgtatcgatactacgaattggcactgagtcctgtactacagcgtatggagcgcactggc
atcgccgttgatccgcagcggctgcatgagcagtccagggcattgagtgcccgcctcaag
gagctggaggagcaggtctacagcgccgctggcgaaaccttcaatctgggttctcccaag
cagttgcaggcaattctgtatgacaagttgaacctgcctgttttgaaaaaaaccccgaaa
ggccagccatctactgccgaggcggtactgcaggagctggcgctggactacgagctgcct
ggcatgatcatggagcatcgcggtctcagcaagttgaagtctacctacacagaaaaactg
cccttgcagataaatgccggcaccgggcgtatccattccacctttcagcaggcggtcgca
gcgactggccgtctgtcatccaccgatcccaatttgcagaacatcccgatccgtagcgtt
gaagggcggaagatccgacaggcctttgttgcagcgccaggctataaactgctggctgca
gactactcgcaggttgagttgcgaatcatggcccatctatcgcaggacaagggtttggtg
accgcttttgccaatgctcaggatgtacaccgtgcgacggcgtctgaagtgtttggcgtg
gcactggatgaggtgactgcggaacagcgtcggcgagccaaggccatcaatttcggactg
atctacggaatgtcagccttcggcctggcccggcaattgggcattgaacgccatgacgcc
cagcaatacgtcgatcgctattttgaacgctaccccggtgttcaggactatatggaacgc
acgcgcgaactggcagaatcgcagggatacgtcgaaacgctgtttggacgacgcctgtat
ttgcccgatatcaaggcgggcaatggcatgttgcgcaaagccgcccagcggaccgcgatc
aacgcgcccatgcagggtacggcagccgacattatcaagcaggcaatggtcgacatagac
cattggctgcaaactggcgtgctggatgcgcgactggtactacaagtacacgatgaactg
atttttgaggtgagcgacaacgacgtgccgttactctctgacggcgtgcgattccgcatg
gcaagtgccgcttcgctggacgtgccgctggtggtggatattggcgtgggagataattgg
gaccaggctcactga
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