Pseudohongiella spirulinae: PS2015_557
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Entry
PS2015_557 CDS
T04158
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pspi
Pseudohongiella spirulinae
Pathway
pspi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PS2015_557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspi03019
]
PS2015_557
03400 DNA repair and recombination proteins [BR:
pspi03400
]
PS2015_557
Enzymes [BR:
pspi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PS2015_557
Messenger RNA biogenesis [BR:
pspi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PS2015_557
DNA repair and recombination proteins [BR:
pspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PS2015_557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALO45240
UniProt:
A0A0S2KAC8
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All DBs
Position
567849..569669
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AA seq
606 aa
AA seq
DB search
MPDLQQAQRVLREVFGYEQFRGAQADIVDTVVSGQNALVLMPTGGGKSLCYQIPSIVRPG
VGIVISPLIALMQDQVDALRELGVRAGFINSSLSSAEYGQMMTELRAGRLDLLYIAPERF
SQAATLELFDTLPIALFAIDEAHCVSQWGHDFRADYLSLSILQQRYPHVPRIALTATADA
ATRDEIVERLALHDAEHFVTGFDRPNIQYRITQKRSPRQQLLDFLRREHSGDAGIIYCLS
RRKTEETADWLQQQGFDALPYHAGLSAEQRLRHQQRFLREDGVIVVATIAFGMGIDKPDV
RFIVHLDLPRSLESYYQETGRAGRDGEPATAWMVYGLQDVIKLRQMMDGSQGNEQFKRLE
RIRLDAMLGLCEITSCRRQALRAYFGEQAPDQCGNCDTCLNPPPTWDGTQAAQKALSCVY
RTGQRFGVAYLIEVLSGLESERILSNGHQRVSTFGIGRELDKSQWQSVFRQLVARGYLGV
DHASFGGLYLTEKARPVLRGEETVQLREDIKEVSARSRRGSDRGHAMLPEDRRLWEALRQ
CRKQLAEEHDVPPYVIFHDATLQDMVELRPLNEQQLLAINGVGQGKLSKYGQEFLRIINE
HELEVL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttgcagcaggcgcaaagggtgttgcgcgaggtcttcggctacgagcaattc
cgtggtgcccaggcggatattgtcgataccgtggtcagtggccagaatgcgctggtgctg
atgcccaccggcggcggtaaatccctgtgttaccagattccttccattgtgcggcccggc
gtgggcattgtgatttcccccctgatcgccctgatgcaggatcaggtggatgctctgcgc
gagctgggcgtgcgggccggatttatcaactcctcactgtcttcggcggaatacgggcag
atgatgacggagctgcgcgctggcaggctggacctgctgtatatcgcgccagaacgcttt
agtcaggcggcgacgctggagctgtttgataccctgccaattgctctgtttgccattgat
gaagcgcactgtgtatcgcagtgggggcatgactttcgggccgattacctgagtttgtcc
attttacagcaacgctatccgcatgtgccgcgcattgccctgaccgctacggctgatgcc
gccacccgtgatgaaattgtcgaacgtctggcattgcatgacgcggagcactttgtcacc
ggtttcgatcgccctaatattcagtaccgcatcactcagaaacgtagtccccgccaacaa
ttgctggactttctgcgtcgcgagcacagtggcgacgccggcattatttattgtctgtcg
aggcgcaaaacggaagaaaccgccgattggctgcagcagcagggttttgatgccttgccc
tatcatgcggggctcagtgccgaacaacgcctgcgtcatcagcagcgctttctgcgcgaa
gacggcgtcattgtggtggccaccattgcctttggcatgggcatcgacaagccggatgtg
cgttttattgtgcatctggatctgccgcgcagtcttgaatcttattatcaggaaaccggt
cgcgccggtcgtgatggggaacctgcgacggcctggatggtctatggtctgcaggatgta
ataaagctgcggcagatgatggatggctcgcagggcaatgagcagtttaaacgcctggag
cgcatccgcctggatgccatgctgggcttgtgtgaaatcaccagttgccgccgtcaggca
ctgcgggcgtattttggtgagcaggcgccggatcaatgtggtaattgcgatacctgcctg
aatccgccgcccacctgggatggcacgcaagcggcgcagaaggccttgtcatgtgtgtac
cgcaccggtcagcgcttcggtgtggcctatctgattgaggtgctgagcgggctggaaagt
gagcgcatactgtcaaacgggcaccagcgagtcagcacctttggcataggccgggagctg
gacaagagccagtggcagtcggtgttccggcagttggtggcacgcggttatctgggggtg
gatcatgccagttttggtggtttgtatctgaccgagaaagccaggccggtactgcgcggc
gaggaaacggtgcagcttcgcgaagacatcaaagaagtgtctgcccggtcacgccgcggc
agcgatcgcggacatgccatgctgccggaagaccggcggctgtgggaggctttacgtcaa
tgccgcaagcaactggcagaagagcatgatgtgccgccttacgtgatttttcacgatgct
accctgcaggatatggtggagcttcggcccctgaatgagcagcaactgctggccattaat
ggggtggggcagggcaaactgagcaagtacggacaggaattcttgcgcataatcaatgag
catgagctggaagtgttatag
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