Paenibacillus spongiae: L1F29_00145
Help
Entry
L1F29_00145 CDS
T09530
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
L1F29_00145 (rnmV)
Enzymes [BR:
pspn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
L1F29_00145 (rnmV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UVI30349
LinkDB
All DBs
Position
29854..30423
Genome browser
AA seq
189 aa
AA seq
DB search
MIKEIIVVEGKDDTVAIKRALEAETIETGGSAVGEDVLRRVALAQQRRGVIIFTDPDHAG
ERIRKIVAQRVPGCKHAFLPQEEALYKGDIGVENASPEAIRRALANVRTEVAEEQADTAP
EITWDDLMKAGLLVNAQASERRLRMGNLLGIGYANGKQFYKRCTMFRITREEFEQALARM
EQENGGSES
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggaaatcatcgtcgtagagggcaaggacgatacggttgccattaagcgggcg
cttgaagcggagacgatcgagacaggcggttctgcggtcggtgaagacgtgctccgaaga
gtggcgcttgcccagcagcgcagaggggttattatctttacggatccggatcatgcaggc
gaacgaatccgtaaaattgtcgcgcagcgggttccaggctgcaagcatgcgtttcttccg
caggaagaagcgctctataagggcgatatcggggtagagaatgcatcgcctgaagcaata
agacgggcgcttgcgaatgtacggacggaagtcgcagaggaacaagcggatacggcgccg
gagattacgtgggatgacttgatgaaggccggactgctggtaaatgcccaagcgtcggag
cgcaggctcagaatgggcaacttactcgggatcggttatgcgaacgggaaacagttctat
aagcgctgcaccatgttccggataacgcgtgaagaattcgagcaggcgttagcgcgtatg
gagcaggagaacgggggaagcgaatcatga
DBGET
integrated database retrieval system
