Paenibacillus spongiae: L1F29_02185
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Entry
L1F29_02185 CDS
T09530
Name
(GenBank) cadherin-like beta sandwich domain-containing protein
Organism
pspn
Paenibacillus spongiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin-like
SLH
CarboxypepD_reg
DUF6242
PD40
fn3
DUF11
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
UVI30712
LinkDB
All DBs
Position
494724..503432
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AA seq
2902 aa
AA seq
DB search
MSRRLSMRWKQGVALLLAVTLVLSTFPAASAAGREGQSNEDYQQMADLMKVVYAAMAASD
GNDGEKPSEPPGTGGAAPLSAPAGAGAPLSWNMLSKAGGTRLPIIYDGNHPEVKLSADGR
YIGFKKFEYKAEPLEIKSVISVYDRVTGVTDNVMGPGSQQTDRMLHFDMSADSRYVAYSF
EQNLMDPSAQVYLFDRETRNQTVITAVGGESWDDAYSNRVSMSADGRYVVFDSAAAGLVP
EDDDDIRDVFVYDQDDGSIQRISTRAGMEDYDHGNSMAASISGDGRYIAFQTDARLVDDD
LNFQSDIYVYDRENDAVPFQRISLGLNGEEADSRSGDPSISADGQVIAFESEASNLVEGD
SNEQKDIFVYDRRKAAATRVSLGAGGVQFARESERPVISDDGAYVGFQFAYQWVEDTDDD
HDNDEENDLPEEAYVADIASQIAVPVTVPNSPHRLVNPSQRPVVGGGGTLVAYFSNYLDT
FGTEEFELPGIFIAARGEAPVWPAGSKLEPSERTDESVKLSWQDAADAGGILGYHVYEDG
TIIGYVPYSGAGGSYTAAGLLPGADHLFQVEAVNAGYHESFGGPTYKLGAGGENPGGQLR
VTWETDDMRHGMLLAGSELVFTAYGDPGKKADAELTYWVWKNESAPETRKAVLPMTETAS
TPGMYRITYKMEEGTSELTSLNVKLTDPAKPGEAVEKQAGGFPLQVAGSLAIGFDNPGGA
SLNGGILSVFSSQYGEQISVLSGSDPVTVRGIVPGKDYTVVLRSADYRYVWAKQEQVRAE
AGRTRTISMPVVQPAKARFQIVDPTGLPVSGVRVELFDAKQNYIGFDYSGSDGWTNWEDN
LQAGEKLTAKVDIGERLMEPVPNQEVLLAPGANETIVKLKAAGEGLLEGFVRSPSGQPVR
NALVTSTQTYRGQQVVRSARTNLEGAYRLSLLAGEAQLEASEGSYQYSTENALQVQIAEG
KTTTLDIPVKQPGRGVVNLEVYLKYIDSELIGPVNLEQMGFLTRVESKFGWMTGYFHNAY
HFQGNPNDTVSVCVTATIPAYMTACQDVKLDANANGTAKLYLEEKGGRIQGALAKTDHRW
VSGRLYKINDKGYKISSGYLGDEDFSDSGFDINIPEPGTYVMELTRQLEGAQGKYEYASV
QFTVAEQQILQLGTVGFTGRSYFSTYDGNYFAVSPNRITPGSTVSFRVGYKNGSTSAADN
ASLLIDIPEGLTPVADAGGRIAVSGDAAAGEAKLEGRTLIVPLGTIASKKSGTVGLQAKV
DPAFNKSKVNTSARIRADIGGEQVEEAIGSIQLDAPMVTIDAPDRVFMKTIALSGLAPAG
SAVKVYDGKALLGAATAAPSGTWSLEAELPDLGDPGMHALRAETEAGGAKLQSEAAYVSY
DTKKPRLLEVAMAQAPSGKWVTMDTRLGVSRLPYTVVPGNPFQFELKFDRPDDVENVYVY
LEGQSGEPVKAVRDGGLFRAIAPTGKDSLGDIYVDFDTKPEPFAFDVSDIPALDEMRQSL
PPAMRDFELEVTSPFELKNGKSSGTVRLTFPQLEDMTMTVTLTLEPNANYSATPEEIELA
QRSGSPLLSGTVGLTETEDGFKTFAKGYVPAAVLFPNGWPAGLKTMQASGEAGAFAPDPT
FVAVTTETYTQFGPNGSEFGTFNSIKNQYDGMQGFAEKINKITYKVQASGLDCLSELPRT
VKQAGKALVAVVGGEVAKFGLGVWTAAMGLSGAGAVAAAGTSAVIGTKIDNYVDQQIDAV
GTGYNQCLNEDVDKEKRKRWKIAKLRWIYDPSGYVYEAVPGNRLSGVKATVLYQDPDSGE
WTVWDAGPYEQINPHDTNGEGKYGWDVPPGKWKVVWEKAGYETVSSAELDVPPPHTEVNA
GMVSREAPKVKSVQGFTSAGGSYAEVLLTKHVKVTELPAQAVTIMDPEGKVLEGTLSFEK
AEANPAGPDGELLSQIVRFTPKSGTLAAGLGYRVKVNAGYFQSYAGVWMNESNEGLFSVS
IRDEQGPSAAGAAVEGEGMIIRVTFDEPLEAVADAAKLEWNGSGEAIASAVRSAVEDDAN
TILISLKEPLAAGETGELKLHAGVVSDMAGNGSKEKTLLVSRQMVSNNAALSGLSIEEGG
LTPDFDPERLSYTVEVPSSTEQVRINAVTSDPQAKLVIEGIDALSGAAAAAAIPKDGTID
VRVIAADGKTVRDYTIQVNRKADPVSSDATLSALTVTPGTLTPAFDPVKDAYSVTVGKDV
TSLQVTATKNDPKAKSLTINGDAAVSGTAMAVAIPADGLITIAVTAEDGTTVRSYKIQVN
READPVSSDATLSALTVTPGTLTPAFDPAKDAYSVTVGKDVTSLQVTATKNDPKAKSLTV
NGDAAVSGTAMAVAIPADGLITVAVTAEDGTTVRSYKIQVNREADPVSSDATLSALTVTP
GKLTPAFDPARNAYSITLGIGVSKLHVKATMNDPKAKSLTINGKDAVSGTSMTVTIPAGE
SRVEIVVTAEDGKKTATYDIQVKRNNPGPGPGPGPGPGPGPGPDPDEAVIKTEKFTSGNG
GSGLLIALRSRAIEKALQSDANGQKRLNVEVGEQASEYVMRLTADTLAELKKHNASLVFK
PGAMLASIPASMIQSAVLPSGASWNLSFAEVTAQQEKAYAEAAARQSGKALKPIGKPMII
ELEMMQGQQSTPVELQSGHSILIELSADTAQQQALYRFNPSFSSWQYVWNQEAASMEKRI
AFPIRSSGHYAVLAYTNTFTDIAGHWAAPDIRWTAQRLLVKGATPKLFMPNQAVTRAEFT
VLLVRAIGLTIAESDKGDARFADVGKGDWYYPEVEAAAAEGLMQGVMGSRLSPNAPITRE
EMAVMVWRAYAWLHDADDSRPNYKLLDKFKDKGRISGWAKKAIALSLQAGLIEGTSPVTF
EPGGFATRAQAAVIVKRLLSGL
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtaggttaagcatgagatggaaacagggagtggcgctgctgcttgcagtaacg
ctggttttgtcgacctttccggcagcgtcggccgccggccgggaagggcaaagcaacgaa
gattatcaacagatggcggatcttatgaaggtagtctatgccgcgatggcggcatcagac
gggaatgatggagagaagccgagcgagcccccgggaacgggcggcgcagcgcccttatcg
gcgccggcaggggcgggggcgccattgtcctggaacatgctgtccaaggctggcggaacc
aggctcccgataatctacgacgggaatcatccggaagtgaagctgagtgctgacgggcgc
tacatcggcttcaaaaaattcgagtacaaagcggaacctctggagatcaagtcggtcatc
tccgtttacgaccgcgtgaccggcgtcacggataacgtgatgggcccgggcagccagcag
acggaccgaatgctgcatttcgatatgagcgccgactcacgatacgtcgcttactcgttt
gagcagaatttgatggacccatcggcgcaagtctatttattcgaccgcgaaacccggaat
caaaccgtcattacggccgtgggcggagagagttgggatgatgcgtattcgaacagggtg
tcgatgagcgcggatggccgttatgtcgtattcgactcggctgccgccggtctcgtgccg
gaagacgacgacgacatccgcgacgtattcgtgtacgaccaagacgacggttcgattcag
cgcatcagcacgcgcgcaggaatggaagactacgatcatggcaacagcatggctgcttcc
atcagcggcgacggacgctatatcgcgttccagacggatgcgagactcgttgatgacgac
ttaaatttccagtcggatatttatgtctatgaccgcgagaacgatgctgtcccgttccaa
cgcatcagcctcgggttgaacggagaggaagccgattcccgcagcggcgatccgtccatc
agcgcggatgggcaagtgattgcctttgaatcggaggcgagcaacctcgttgaaggcgat
tcaaacgaacagaaagatatttttgtctatgaccggagaaaggcagctgcaacccgggtg
tcattgggtgcgggcggggtccaattcgcacgggagagcgagcgtccggtcatcagcgac
gacggagcgtacgtcggatttcagttcgcttaccaatgggtagaggatacggacgacgac
cacgacaacgacgaagagaacgatctccccgaggaggcatacgtggcggatatcgcctcg
cagattgccgttcccgtgaccgtgccgaacagtcctcaccggttggtcaatccgagccaa
cgcccggtcgtcggaggcggcggaacgctcgtcgcgtatttctcgaattatttggacacc
ttcggcacggaggagttcgagcttccgggtatattcattgcagccagaggcgaagcgccc
gtctggcctgcggggagcaagctggagccgtccgaacggacggacgagagcgtgaagctg
agctggcaggatgccgccgatgcaggcggaatactcggctaccatgtgtatgaggacgga
acgattatcggctatgtgccatactcgggcgcgggcggctcttatacggcagcgggactc
ctgccgggcgccgatcacctgttccaggtggaagcggtgaacgcagggtatcacgaaagc
ttcggcggcccgacctacaaactgggtgcgggcggcgagaatccgggcggccagctgcgc
gtcacctgggaaaccgacgacatgagacacggaatgctgctcgcgggcagcgagctggtc
tttactgcatacggcgatccgggcaagaaggccgatgccgagctgacgtattgggtatgg
aagaacgaatcggcaccggagacgcgcaaagcggtactgcctatgacggaaaccgcatcg
actccgggcatgtacaggatcacctataaaatggaggaaggcaccagcgaattgacttcg
ttgaacgtcaaattgacggaccccgcaaaaccgggcgaggcggtggagaagcaggcgggc
ggttttccgttacaagtggcgggcagcctggccatcgggttcgacaacccgggaggggca
agtctgaacggcggcattctgtcggtgttcagcagtcaatacggcgaacagatatccgtt
ctgtccggatcggatcccgttaccgtccggggaatcgtgccgggcaaagactataccgtc
gtgcttcgctccgcggattatcgctatgtgtgggcaaagcaggagcaggtgcgggcggag
gccggacggacgcggaccatcagcatgccggtcgtgcagcctgcgaaggcccggttccaa
atcgtcgatccgaccggtctgccggttagcggcgttcgggtcgagctgtttgatgcgaag
cagaattacatcggtttcgattacagtggcagcgatggttggacgaattgggaggataac
ctgcaggcgggagagaagctgaccgccaaggtggacatcggtgaacggctgatggagccg
gtgccgaatcaagaggtgctgctcgcgccgggcgcgaatgagacaatcgtcaagctgaag
gcagcgggagaaggcctgctggaagggttcgtaaggtccccgtccggccagcccgtgagg
aacgcgctggttacgtcgacgcaaacctatcgcggccagcaggtcgtccgctcggcgaga
accaatctggagggcgcttaccggctgtcgctgctggcgggagaagcgcagctggaggca
tcggaaggttcctaccagtacagtacggagaacgccctccaggtccagatcgccgagggt
aagacgactacgctggacattccggtgaagcagccgggccgcggcgtcgtcaatctcgag
gtatatttgaaatatatcgacagcgagttgatcgggcctgtcaatctggagcagatgggc
ttccttacgcgagtggaatcgaaattcggctggatgacgggttattttcacaatgcttat
catttccagggcaatccgaacgataccgtatccgtatgcgtcaccgccacgattccggct
tacatgacggcgtgtcaggacgtgaagctggatgcgaacgcgaacggaaccgccaaactg
tatttggaagaaaagggcgggcgcatccaaggtgcgctggcgaaaaccgatcaccgttgg
gtttcgggaagactctacaagattaacgataaagggtacaaaatatcgtcggggtacctc
ggggacgaagatttctcggacagcggcttcgatatcaacattccggagccgggcacctac
gtcatggagctcacccggcagctcgagggcgcacaagggaaatacgagtatgcgagcgtg
caattcacggtcgcggagcagcagattttgcagctggggacggtcgggttcacgggcaga
agctatttctctacttatgacggcaattatttcgcggtatcgccgaatcggatcacgccc
ggcagtaccgtcagtttcagggtcggttacaagaacggcagcacatcggctgccgataat
gcaagcttgctgatcgacataccggaagggctgacccccgtggcggacgcgggcgggcgc
atcgccgttagcggggacgcggcggcaggggaagccaagctggaagggcggacgctgatc
gtgccgctcggaacgattgcctcgaagaaatccggcacagtcggccttcaggccaaagtc
gatccggcatttaataagagcaaggtcaatacgtcggcccgcattcgcgccgatatcggc
ggcgaacaggtggaggaggcgattggcagcatacagctggacgcgccgatggtaacgatt
gacgcgccggaccgggtgtttatgaagacgattgccctgagcggacttgcgcccgcgggc
agcgccgtgaaggtatatgacggcaaggcgctgctgggcgccgcgaccgccgcgccgtcg
gggacgtggagcctggaggctgagctgcccgatctgggcgatccggggatgcacgcgctg
cgcgccgagacggaggccggcggcgcgaagcttcagtcggaggcggcttatgtcagctac
gacacgaagaaaccgaggctgcttgaggttgcgatggcgcaagcgccttccggcaaatgg
gtgacgatggacacgcgcctgggcgtttcccgtcttccgtataccgtcgttccgggaaat
ccgttccaattcgagctgaaattcgatcggccggacgatgtcgagaacgtgtacgtttat
ttggaggggcagagcggagaaccggtgaaagccgtgagggacggcggcctattccgcgcg
atcgctccgaccggcaaagattccctcggcgacatctatgtcgatttcgatacgaagccg
gaaccgttcgcgttcgacgtcagcgacataccggcgctcgacgagatgcggcaatcgctt
ccgccggccatgcgcgacttcgagcttgaggtgacgtctccgttcgagctgaagaacggc
aaatcttcgggaaccgtgcggctgacgttccctcaattggaagatatgacgatgacggtt
acgctcacgcttgagccgaacgcgaattattcggccacgccggaggagatcgagcttgcc
cagcgttcgggaagtccgctgctaagcggcacggtcggactgacggaaacggaagacggg
ttcaagacattcgcgaagggttacgtgccggcggcagtcctgttcccgaacggctggcct
gccggattgaaaacgatgcaggcatccggcgaggcgggcgcgttcgctcccgacccgact
ttcgtggccgtgacgacggagacgtacacgcagttcggtccgaacggttcggagttcggg
acgttcaactccattaagaaccaatatgacggcatgcagggattcgccgaaaaaatcaac
aaaataacgtacaaagtccaagcgagcggtttagattgcctatcggagcttccgcgcacg
gtcaagcaggcgggcaaagcgcttgtcgccgtcgtcgggggcgaagtcgccaagttcggg
ctcggcgtctggaccgcggcgatggggctatcgggcgcaggggcggtggcggccgcgggc
acatcggcggtgatcgggaccaagattgacaattatgtcgaccagcaaatcgatgccgtc
ggcacgggctacaaccaatgcctgaacgaagatgtcgataaggagaaacgcaagcggtgg
aaaatcgccaagctgcgctggatctacgacccaagcggctatgtgtacgaagccgtgccc
gggaaccggctgagcggcgtaaaggcgacggtgctctatcaggatccggatagcggggaa
tggaccgtgtgggatgcgggtccatatgagcaaatcaacccgcatgatacgaatggagaa
ggcaaatacggctgggatgtcccgccgggcaagtggaaggtcgtctgggagaaagccggc
tacgaaacggtatcgagtgccgagctggacgttcctccgccgcatacggaagtgaatgcg
gggatggtatccagggaagcgccgaaggtgaagtccgtccaaggcttcacatctgcgggc
ggaagctacgcagaggtactgctgaccaagcatgtgaaggtaacggagctcccggctcaa
gccgtgacgataatggatcccgaaggaaaagtgctggaagggacgttgtccttcgagaaa
gcggaggcgaacccggcgggtccggatggcgagctgctgtcgcaaatcgtccggtttacg
ccgaagagcggcacgctggcggcgggattgggatatcgagtaaaggtgaacgccggatat
ttccagagctatgcgggcgtttggatgaatgaaagtaatgagggcttgttctcagtcagc
attcgcgatgaacaaggtccatccgccgcaggcgcggcagtcgaaggagaagggatgatt
attcgcgtcaccttcgacgagcccttggaggctgtggccgacgcggcgaaattggaatgg
aacggcagcggagaagcaatcgcatcggcggttcgatccgcggtcgaggatgacgcaaac
accattctcatcagcttgaaagaaccgctggcggccggggaaaccggcgaactgaagctg
catgccggggtggtctccgacatggctggcaacggctcgaaggagaagacgctgctcgtt
tccaggcagatggtttcgaacaatgccgcgctgtcgggactttcaatagaagaaggcggg
ttgacgcctgactttgatcctgagcggctgtcctataccgtggaggtgccgtcttccaca
gagcaggttcggattaatgcggtaacgagcgatccgcaagcgaagttagtcattgaaggc
atcgatgccttaagcggcgcggcggccgctgcagccattccgaaggacggcactattgat
gtccgcgtcatcgcggcggatggcaaaaccgtccgcgactacacgattcaagtgaaccgt
aaagcggatcctgtatcgagcgacgcgacgctctcggcgctgacggtaacgccgggcacg
ctgacgccggcattcgatccggtgaaggatgcatacagcgtcaccgtaggcaaagatgtg
acgtcgctgcaagtaacggcgacgaagaacgatccgaaggcgaagagcctgacgatcaac
ggcgatgccgccgtgagcggcacggcgatggcggtagctattccggccgatggcctgatc
accatcgccgtgaccgcggaggatggaacgaccgtgcggtcgtataagatccaagtgaac
cgcgaagcggatccggtatcgagcgacgcgacgctctcggcgctgacggtaacgccgggt
acgctgacgccggcattcgatccggcgaaggatgcctacagcgtcaccgtaggcaaagat
gtgacgtcgctgcaagtaacggcgacgaagaacgatccgaaggcgaagagcctgacggtc
aacggcgatgccgccgtgagcggcacggcgatggcggtagctatcccggccgatggcctg
atcaccgtcgccgtgaccgcggaggatggaacgaccgtgcggtcgtataagatccaagtg
aaccgcgaggcggatccggtatcgagcgatgcgacgctctcggcgctaacggtaacgccg
ggtaagctgacgccggcattcgatccggcgaggaatgcatacagcatcacactgggtata
ggagtctcgaagctgcatgtgaaggcgacaatgaatgatccgaaggcgaagagtctgacg
attaacggcaaagatgccgtgagcggcacgtcaatgaccgtgaccatcccggctggagaa
agccgagtcgaaatcgtcgtgaccgcagaggacggcaagaagaccgcgacatacgacatt
caagtcaagcgaaacaaccctggacccggcccgggccccggacctggtccaggaccggga
ccaggtccggatccggacgaagccgtgataaagacggagaagttcacaagcggcaatggc
ggatcaggactgctgattgcactccggagcagagcgatcgagaaggctctgcagtccgat
gccaacggacaaaagcggttgaatgttgaagtcggcgagcaggcgagcgaatatgtgatg
cgccttactgccgacacgctggccgagttgaagaaacataacgccagcctcgtctttaaa
ccgggtgccatgctggcctcgataccggcaagcatgatccaatcggccgtgctgccgtcc
ggcgcttcttggaatctctcgtttgccgaggtcacggctcaacaggagaaggcttacgcc
gaagccgcggcccggcagagcggaaaagcgctgaagccgatcgggaagccgatgatcatc
gagctggaaatgatgcaaggacaacaaagtacgccggtcgagctgcagtccggtcattcg
attctcattgaactgtcggccgatacggctcagcagcaagctctataccggttcaatccg
agcttcagcagctggcagtacgtctggaatcaagaagcggcaagcatggagaaacgcatc
gcgttcccgattcgctcatccgggcattatgccgtcttggcgtatacgaatacgttcacg
gatatcgcgggacattgggcggcgccggacatacgctggacggcgcagcggcttctcgtc
aaaggcgcaacgccgaaattgttcatgccgaatcaagcggtaacgcgcgccgaattcact
gtgctgctcgtaagagcaataggccttacgatcgcagagtctgataaaggggacgcgagg
tttgccgatgttggcaagggggactggtattaccccgaggtggaagcggccgccgctgag
ggactgatgcagggagtaatgggcagccggttatcgccgaatgcaccgattaccagggaa
gagatggccgttatggtttggcgggcgtatgcgtggctgcatgatgccgatgatagtcgg
ccgaattacaagctgctcgacaaattcaaagacaaaggccgaataagcggctgggctaag
aaggccatcgccctttcccttcaggcagggcttatcgaaggaacttcacccgtgaccttc
gagcctggaggatttgcgacaagagcgcaagctgccgtcatcgtgaaacggctgctgtca
ggactgtaa
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integrated database retrieval system
