KEGG   Paenibacillus spongiae: L1F29_03850
Entry
L1F29_03850       CDS       T09530                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pspn  Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:pspn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pspn02048]
    L1F29_03850
Enzymes [BR:pspn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     L1F29_03850
Prokaryotic defense system [BR:pspn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   L1F29_03850
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII SNF2-rel_dom Ribosomal_L17
Other DBs
NCBI-ProteinID: UVI31009
LinkDB
Position
894420..897584
AA seq 1054 aa
MDLNFLKGQFTEEQLENAIIELFQAQDYTSVLGDTMHRKFEDILLEDDLRTFLTNRYKGE
SLTENEIQKIINRLKLIPSDPLYQGNREAFWLVNEGFDLPRDDAGQVALHVGYIDYDVPK
NNIFKVVNQYSIQGEHLRRPDLLLFMNGIPVAIFEFKSAIKEDTTIYDAWEQIHKRYCRD
IPKLMKYCFLSVITDGANTKLASIFTPYEYYYAWNKANDEEKVANGISALFTMIRGAFSK
GRVTAILRDFVYYPDESKGELTVITRYPQFFAANKMLANIKEHLRPHGDGKGGTYFGATG
CGKTYTMLFLSRLLALRERETFNNPTIVIIADREDLDTQTSELFVASKRYLHDKNVRSIE
NRKDLQEALGGAASGGVYITTIQKFCESTGLLSDRNNIICISDEAHRTQTNTGTKLKVTD
KGVTTTFGFAKYLRDSFPNATYCGFTGTPIDETIAVFGDVVDSYTMKESSDDGITVRIAY
EPRLARVILSEEQAKEIQRYYEKCMEEGANPVQVEESKRAMTEMKRVLSHPDRLKRLAAD
IVTHYEALSAEKPAIVQKAMIVCVDRTLAFKLYKEIIDIRPDWNIPRKSENEAALSEQKL
EKLIPLEKIKLVATQGENDEKELFDLCGNKEYRAKLDKQFKNNDSNFKIAIVVDMWITGF
DVPSLTAMYIDKPIQKHTLIQTISRVNRVFEGKDKGLVVDYIGIKDDMLEAIKIYGGPQE
SPIDELRISLLVFRNHLSLIDALMNGFNAEKFYLGQPLERLVCLNTASEYVQISKEVEKR
FMDLSRKMKAAYEICFPSGELTDLEVTRAQFYLAIRSIIFKQTKGEAPDAEKMNHVVEKM
VQEAITCTGIENIVNAEKPEDVFGEEFQKKLEEIDLPISKFNALLKLLRKAISGYGKTNK
VKAIVFDERLKKVIETYNNRDKLVFTSEVVADFINDLTDELIKIMADLQEDKASFEKLGI
TYEEKAFYDILVKVRDEHQFRYDDEKCIVLAREIKELVDEKAQYADWSTRDDIKNQLNMD
LTVLLYKNGYPPEWDEEVFEQVLEQAENFKKYAE
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggatttaaacttcttaaagggtcaatttaccgaggaacaattggaaaatgccataatt
gagttgtttcaggcgcaagactatacctctgtactcggtgataccatgcaccgtaaattt
gaagacattctgcttgaggatgacttgcgcacgtttcttactaacaggtataaaggtgaa
agtctgactgagaacgaaattcaaaagatcatcaatcgcctgaaacttattccatctgac
ccgctgtatcaaggcaaccgcgaggcattttggctggtaaacgaaggatttgacctccca
cgtgacgacgcgggacaagttgcacttcacgtgggttatattgattatgatgtgccaaag
aataatatcttcaaggttgtcaaccagtattccattcagggcgaacatctgcgtcgccct
gatttgctattattcatgaatggcattcctgtcgcaatatttgaatttaaatcggcaata
aaggaagatacgactatctatgacgcttgggaacagattcataagcgatactgccgcgac
atccccaagctaatgaaatactgcttcctttccgtcattactgacggagcgaacacaaag
cttgcgagtatttttacgccttatgaatattattatgcgtggaataaggcaaacgatgag
gagaaggttgcaaacggcattagtgcgctgtttacaatgattcggggtgctttttctaaa
ggtagggtgactgccattctccgtgacttcgtgtattatcctgatgagagcaaaggtgaa
cttacggtcattaccaggtacccacagttctttgccgcgaacaagatgctcgcgaacatt
aaggaacatctacgtccgcacggcgacggtaaaggcggtacgtactttggtgcgacgggc
tgcggaaaaacctatactatgctgtttctatctcgtttgcttgcacttcgggaacgggaa
acattcaataacccgactatcgtcattattgcagatcgagaggatttagacacccaaact
tccgagttgttcgttgcatctaaacgctacctacacgataagaatgtgagaagcattgaa
aaccgaaaagatttgcaggaggcacttggtggcgcagccagcggtggcgtttatattaca
acgatccagaagttctgtgaatcgacggggcttctttctgaccgcaataatatcatctgt
atctcagatgaggcgcatagaacacaaacgaatacaggcacaaagctaaaagttaccgat
aaaggcgttacaaccacttttggatttgcgaaatacctccgtgattctttccctaacgca
acttactgtggctttaccggaaccccgattgacgagaccatagcggtgttcggggatgtg
gttgatagttataccatgaaagaatccagtgacgacggcattaccgtccgtattgcctat
gagccgcggttggctcgggtcattctttccgaggaacaagcgaaagaaatccaaagatat
tacgaaaaatgtatggaagagggagccaatccggtccaggtcgaggagagtaagcgcgca
atgaccgagatgaaacgcgtacttagccatcccgaccgactaaagagactggcggcggac
attgtaacgcactacgaagcgttaagtgcagaaaagcctgctatcgtacaaaaagcaatg
attgtttgtgtggacagaacgctggctttcaagctgtataaagaaatcatcgatattcgt
cctgattggaacatcccaagaaaatcggaaaacgaagccgcactatcagagcaaaagctt
gagaagctaattccgttagaaaaaattaaattggtggctactcagggcgaaaacgatgaa
aaagaattatttgatttgtgcggtaataaagaataccgagcgaagttggacaagcaattc
aaaaacaacgattccaacttcaaaatcgctatcgtagttgatatgtggataaccggtttt
gacgtgccatcactcaccgcgatgtacatagataagcctatccaaaagcacactctcatt
cagacgatttcacgagtcaaccgggtttttgagggaaaggacaaaggcttggtggtcgat
tatatcgggatcaaggatgatatgctagaagccataaaaatttatggggggccacaggaa
agcccgattgatgaactgcggatttctctattagtgttccgcaatcatctgtctctcatt
gatgcgcttatgaacggttttaatgcggagaaattctatttggggcagcctctagagcga
cttgtttgtctgaacacggcctccgaatatgtgcaaataagcaaagaggtcgaaaaacgt
ttcatggatttatcccgtaagatgaaagcagcctatgagatttgcttcccgtctggtgag
ttaacggacttggaagttacaagagcccagttctatcttgcaattcgctctatcatcttt
aagcaaacgaaaggcgaagcgccggacgcggaaaaaatgaatcatgtggttgaaaaaatg
gtgcaggaagctatcacctgtaccggtatcgagaacattgtcaacgcggaaaaacccgaa
gatgttttcggcgaagagtttcaaaaaaaattggaagaaatagacctgccaatatcgaag
tttaacgctttgcttaagctactcaggaaggcgatttcaggctacggaaaaacgaataag
gtaaaggctattgtctttgacgaacggcttaaaaaggttatcgaaacctataataaccgt
gacaaacttgtgtttactagtgaggtcgtggcggactttatcaatgacctaactgacgaa
ctgattaaaataatggccgatttacaggaggacaaggcatcttttgagaaactcggcata
acatatgaggaaaaggctttttacgatatcttagtgaaggtacgtgacgaacaccagttt
agatacgatgatgaaaaatgcatagtacttgccagggaaataaaagagttagttgacgaa
aaagctcaatacgcagactggtctacacgcgatgacatcaagaatcaattaaacatggat
ttgacagttcttctctacaaaaatggatatccgccagagtgggacgaggaagtctttgag
caggtactggagcaggcggagaattttaaaaaatacgctgagtaa

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