KEGG   Paenibacillus spongiae: L1F29_04340
Entry
L1F29_04340       CDS       T09530                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
pspn  Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:pspn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pspn03016]
    L1F29_04340
Enzymes [BR:pspn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     L1F29_04340
Transfer RNA biogenesis [BR:pspn03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    L1F29_04340
 Prokaryotic type
   tRNA splicing ligases
    L1F29_04340
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: UVI31092
UniProt: A0ABY5SEA0
LinkDB
Position
1015071..1016297
AA seq 408 aa
MTYQNIQGVRVWGKPDEGAVQQAKTCNEYGNVVQTLLMADHHKGYSQPIGGVVVYDGQIS
PSGVGYDIACGNKAVRTNLMAADIKPGIAVIMDRIAARISFGVGRVNNVKVDHELFDDPD
WAVYASIGRQEHDKLKALARDQLGTVGSGNHFVDLFEEEETGRLWVSNHFGSRGFGHKTA
SGFINLASGRGFLASAPGEKMDQPPILLDLDDELGDMYYRAMKLAGRYAYAGRDYVIAQV
LAILGAEADFEVHNHHNYAWKEQHGGRNTVVIRKGATPSAPGQLGFIGGSMGDISVIVRG
KDTDENRDAFYSTVHGAGRLMSRTQAAGKMNWKTRKRTGGQISPEQMMDAVHRYGVELRG
AGTDESPFVYRRLQEVLDAHDETIEVLHVLKPIGVCMAGADEFDPYKD
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgacgtatcaaaacatacaaggcgtccgtgtctgggggaagcccgatgaaggcgcggtg
cagcaggcgaagacctgtaacgagtacggcaacgtggtgcagacgctgttgatggcggat
catcacaaaggttacagccagccgattggcggggttgtcgtctatgacgggcaaatatcg
ccgtcaggcgtcggctatgatatcgcctgcgggaacaaggcggtgcgcacgaaccttatg
gccgcggatatcaaaccgggaatagccgttatcatggaccggattgccgcgagaatctca
ttcggtgtcggccgggtcaataacgtgaaggtggatcacgagctgttcgatgatccggat
tgggccgtttatgcgtccataggacgccaggagcacgataaactgaaggcactagcccgg
gatcagctcggaacggtcggaagcgggaatcacttcgtcgatttgttcgaggaggaagag
acggggaggctgtgggtgagcaatcatttcggcagccgaggattcggacataagacggcc
agcggcttcatcaatttggcttcaggacgaggatttttggcttccgcgcccggcgagaag
atggaccagccgccgattctgctcgatcttgacgatgagcttggagatatgtactaccgc
gccatgaagctggccggccgttatgcatatgccggacgtgattacgtgatcgcacaagtg
ctggcgattctcggagcggaagcggacttcgaggtgcataaccatcataactacgcgtgg
aaggagcagcacggcggccggaataccgtcgttatccggaaaggggcgacgccttccgcg
ccgggtcagctcggctttatcgggggcagcatgggggatatttccgtcatcgtgagaggc
aaggataccgatgagaatcgggacgccttctacagcacggttcatggcgcaggcaggctt
atgagccgtacgcaggcggcaggcaagatgaactggaagactcgcaagcgcacgggcggc
cagatctcgccggagcaaatgatggacgctgtccaccgttacggggtcgagctccgcggt
gcgggtacggatgagagcccgttcgtctaccgccggctgcaggaggtgttggacgctcac
gatgaaaccattgaagttctgcacgtactgaaaccgatcggcgtctgtatggccggtgcg
gacgagtttgatccctacaaggattag

DBGET integrated database retrieval system