Paenibacillus spongiae: L1F29_04820
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Entry
L1F29_04820 CDS
T09530
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1F29_04820 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspn03019
]
L1F29_04820 (groL)
03110 Chaperones and folding catalysts [BR:
pspn03110
]
L1F29_04820 (groL)
03029 Mitochondrial biogenesis [BR:
pspn03029
]
L1F29_04820 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspn04147
]
L1F29_04820 (groL)
Enzymes [BR:
pspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L1F29_04820 (groL)
Messenger RNA biogenesis [BR:
pspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L1F29_04820 (groL)
Chaperones and folding catalysts [BR:
pspn03110
]
Heat shock proteins
HSP60 / Chaperonin
L1F29_04820 (groL)
Mitochondrial biogenesis [BR:
pspn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L1F29_04820 (groL)
Exosome [BR:
pspn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L1F29_04820 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L1F29_04820 (groL)
Exosomal proteins of breast cancer cells
L1F29_04820 (groL)
Exosomal proteins of colorectal cancer cells
L1F29_04820 (groL)
Exosomal proteins of bladder cancer cells
L1F29_04820 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
UVI31170
LinkDB
All DBs
Position
1107207..1108835
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIKFGEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVSIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIE
KAVRAAVEELKAIAKPIEGKQSIAQVASISASDDEVGQLIAEAMEKVGNDGVITVEESKG
FATELEVVEGMQFDRGYVSPYMITDTDKMEAVLDNPYILITDKKISNIQEILPVLEKVVQ
SGKQLLIIAEDIEGEAQATIIVNKLRGTFTCVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLELKSTTVEQLGSARQVRITKENTIIVDGSGDKADITARVNQIRTQLEDTTSDFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNV
FKAVAAVQANGDEQTGVNIVLRALEEPVRTIAANAGQEGSVIVERLKKEEIGIGYNAASG
EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTESVVADKPEKDKPAMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaatcaaatttggcgaagacgctcgccgcgcaatgcttcgcggtgtcgat
gctcttgctaatgctgttaaagttacacttggtccaaaaggccgcaacgtggtgcttgag
aagaaattcggcagcccgctgatcacgaacgacggcgtttccatcgcgaaggaaatcgag
ctggaagacgcattcgagaatatgggcgcacagcttgttaaagaagttgcgaccaaaacg
aacgatgttgccggtgacggtacgacgacagctacggttcttgcgcaagcgatgatccgt
gaaggtctgaagaacgtaacggcgggcgctaaccctatggttatccgcaaaggcatcgaa
aaagcggttcgcgcagcagttgaagagctgaaagcaatcgcgaagccgatcgaaggcaag
caatcgatcgcacaagttgcttccatctcggcatcggacgacgaagtcggccaactgatt
gcagaagcaatggaaaaagtgggcaacgacggcgttatcaccgttgaagagtccaaagga
tttgcaacggagcttgaagtggttgaaggcatgcagtttgaccgcggctacgtttcccct
tacatgattaccgatacggacaaaatggaagccgtattggacaacccgtacattctcatc
acagacaagaagatctcgaacattcaagagattctgcctgtactggagaaagtcgtacaa
tccggcaagcagcttctgatcatcgcagaagacatcgaaggcgaagcgcaagcgacgatt
atcgtgaacaagctgcgcggcacgttcacatgcgttgctgtcaaagctccaggcttcggc
gaccgtcgtaaagcgatgctgcaagatatcgctgcattgactggcggccaagtgatcacg
gaagagctcggccttgagctgaaatcgacgacggttgagcagctcggttccgctcgccaa
gttcgtatcacgaaagaaaacacgatcatcgttgacggcagcggcgacaaagcggacatc
acggcacgcgttaaccaaatccgcacgcagctggaagacacgacgtccgacttcgatcgc
gagaagctgcaagagcgtctggcgaagcttgctggcggcgtagccgttatcaaggttggc
gcagcgacggaaaccgaattgaaagagcgcaagctgcgcatcgaagatgccctgaactcc
acccgtgcagcggttgaagaaggcatcgtatccggtggcggtacggcactcgtgaacgta
ttcaaagccgttgcggcagttcaagcgaacggcgacgagcaaacaggcgtgaacatcgtg
cttcgcgcgttggaagagcctgttcgtacgatcgcagcgaatgcgggccaagaaggctcc
gtaatcgtagagcgtctgaagaaagaagaaatcggcatcggctacaacgctgcttccggc
gagtgggtaaacatgtttgaagcaggtatcgttgaccctgcgaaagtaacgcgttctgca
cttcagaatgcagcttccgtagcggctatgttcctgacaaccgaatcggttgttgccgac
aagcctgagaaagataagccagctatgcctgacatgggcggcatgggcggaatgggcggc
atgatgtaa
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