Paenibacillus spongiae: L1F29_05910
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Entry
L1F29_05910 CDS
T09530
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
pspn
Paenibacillus spongiae
Pathway
pspn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L1F29_05910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pspn02022
]
L1F29_05910
Two-component system [BR:
pspn02022
]
NarL family
LiaS-LiaR (cell wall stress response)
L1F29_05910
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
DUF6115
HTH_23
Sigma70_r4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UVI31359
LinkDB
All DBs
Position
1299979..1300638
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AA seq
219 aa
AA seq
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METIEQPIKVLLVDDHEMVRIGLAAVLNTEDGIEVVGEASNGMEGIRLANAYKPDVVLMD
LVMEGMDGVETTKKLLELYPDCKVIVLTSYLDDSKMYPVIEAGAFSYLLKTSRASEIADA
IRAAARGQSVLESQVAMKMMNRFRQPKTERKAAPHEQLTEREMDVLMLVARGLSNQEIAE
ELFIGIKTVKFHVTNIFAKLGVDDRTQAAIYAHKHGIAE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatcgaacaacctattaaagtattgctggtagatgatcatgagatggttcgg
atcggattagccgcagtgttaaatacggaagatggcatcgaggtcgttggagaagcgagc
aacgggatggagggcatccggcttgccaatgcctataaaccggatgtggttctgatggac
ttggtgatggaagggatggacggcgtcgaaacgacgaagaagctccttgagctgtatccg
gattgcaaggtgatcgtactgaccagttacctggacgacagcaagatgtatccggtcatc
gaagccggcgcattcagctatctgctcaaaacatcccgtgcgtcggaaatcgccgatgcg
atccgggcggcggcacgcggacaatcggtattggaatcgcaggtcgccatgaagatgatg
aaccgtttccgtcagccgaagacggagcgcaaggccgcgcctcatgagcagttgacggag
cgggagatggatgtgcttatgctggtcgcgcgaggcctgtccaaccaggaaattgcggaa
gaattattcatcggcattaaaaccgtcaagtttcatgtgacgaatatttttgcgaagctt
ggcgtagatgaccgtacgcaggctgccatctacgcacacaagcatgggatcgccgaatag
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