Paenibacillus spongiae: L1F29_06730
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Entry
L1F29_06730 CDS
T09530
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspn03000
]
L1F29_06730
Transcription factors [BR:
pspn03000
]
Prokaryotic type
Helix-turn-helix
XRE family
L1F29_06730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
LptD_2
Phage_CI_repr
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
UVI31509
LinkDB
All DBs
Position
1493649..1493978
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AA seq
109 aa
AA seq
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MTETIGERIKRIRLSKGKSLSELAESAEVAKSYLSNVERGIQSNPSIQFIEKIAATLNIS
PNALLFDNAADQELDSEWQQLVLDAMASGISKSQFKEFLEFQRWKKTQE
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacgatcggggaacgtattaagcgaattcgcttaagcaaaggaaaatctctt
tccgagttagcggaatccgctgaagtcgcgaaatcctatttaagcaatgtcgagaggggc
attcaaagcaacccctccattcaatttatcgagaagattgctgctacgctgaatatatcg
cccaatgcgctgctgtttgacaacgctgccgaccaggagttggattcggaatggcagcag
cttgtgctggatgcgatggcatcgggcatcagcaagagtcaattcaaggagtttctggag
tttcagcgatggaagaaaacgcaagaataa
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