Paenibacillus spongiae: L1F29_06770
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Entry
L1F29_06770 CDS
T09530
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspn03000
]
L1F29_06770
Transcription factors [BR:
pspn03000
]
Prokaryotic type
Helix-turn-helix
XRE family
L1F29_06770
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
SinI
HTH_25
HTH_26
Phage_CI_repr
HTH_AraC
HTH_37
MarR
HTH_20
HTH_IclR
HTH_24
Sigma70_r4
HTH_WhiA
HTH_5
ElaD-SseL-like_C
LacI
HTH_35
Motif
Other DBs
NCBI-ProteinID:
UVI31517
LinkDB
All DBs
Position
1502390..1502704
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AA seq
104 aa
AA seq
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MIGDRIKELREKKGLTLTELADLAGVSKSYLSHIERKLQNNPSLQMLSKISVPLETKVQY
LLNDQEAPREEIFDQEWLALLNKAIEDGMSKEDFIRLSERVRSQ
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgattggagatcgaattaaagagctaagggagaagaagggccttaccctcaccgagctg
gcggacctagccggcgtttccaaatcttatttgagtcatattgaacgaaagctgcagaac
aatccttcgctgcagatgctatccaaaatttccgtgccgcttgaaacgaaggttcaatac
ctgctgaacgatcaagaagcaccgagagaagaaatattcgatcaagaatggcttgcattg
ctgaataaggcaatcgaggacgggatgagcaaggaagattttattcgtttaagcgaacga
gtgcgatctcaataa
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