Paenibacillus spongiae: L1F29_08820
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Entry
L1F29_08820 CDS
T09530
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00020
Citrate cycle (TCA cycle)
pspn00480
Glutathione metabolism
pspn00720
Other carbon fixation pathways
pspn01100
Metabolic pathways
pspn01110
Biosynthesis of secondary metabolites
pspn01120
Microbial metabolism in diverse environments
pspn01200
Carbon metabolism
pspn01210
2-Oxocarboxylic acid metabolism
pspn01230
Biosynthesis of amino acids
pspn04146
Peroxisome
Module
pspn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspn_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L1F29_08820 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
L1F29_08820 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
L1F29_08820 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L1F29_08820 (icd)
Enzymes [BR:
pspn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
L1F29_08820 (icd)
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
UVI31900
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All DBs
Position
1937018..1938310
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AA seq
430 aa
AA seq
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MKLEKFAMPTEGKQITIDNGVLQVPSNPIIPFIEGDGTGRDIWKASKRVLDAAVEKAYNG
EKKIAWYEVFAGEKAFNAYGEWLPADTLTAIREYIVAIKGPLTTPIGGGIRSLNVALRQE
LDLYTCLRPVRYFNGVPSPVKRPELVDMVIFRENTEDIYAGIEYQEGSDAVKKVIAFLQE
EMGAKNIRFPETSGIGIKPVSAEGSKRLARAAINYAIKHGRKTVTLVHKGNIMKFTEGAF
KNWGYEVAEQEFADQTFTWGQYDRIKEAEGTEAANKAQKEAEAAGKIIVKDAIADIALQQ
VLTRPTDFDVIATLNLNGDYLSDALAAQVGGIGIAPGANINYLTGHAIFEATHGTAPKYA
DLDVVNPGSVILSGVMLLEHLGWQEAADLIYKGMETSINNKTVTYDFARLMEGATEVKCS
AFADEIIKNM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgaaaaattcgcaatgccgacagaaggaaagcaaattacgatcgacaatggc
gtcctgcaagttccgagcaatccaatcattccgtttatcgaaggcgacggcactggccgc
gatatctggaaagcgtccaagcgcgtccttgatgctgccgttgagaaagcctacaatggc
gagaaaaaaatcgcttggtacgaagtctttgccggcgagaaagccttcaatgcttatggt
gagtggctgccagccgatacgcttacggctattcgtgaatatatcgttgcaatcaaaggt
cctttgacgacgccgatcggcggcggaatccgctcgctgaacgttgcgcttcgtcaagag
cttgacctgtatacctgcctgcgtccggttcgttacttcaacggcgtgccttccccggta
aagcgtcctgagcttgtggacatggttattttccgtgagaacacagaggacatctacgcg
ggtattgaatatcaagaaggctcagacgccgtgaagaaagtgattgcgttcctgcaagaa
gaaatgggcgccaagaacatccgcttcccggaaacgtccggtatcggcatcaagcctgtt
tccgcagaaggctcgaagcgtctggctcgcgccgcaatcaactatgcaatcaagcatggc
cgcaaaacggttacgctggtacacaaaggcaacatcatgaagttcacggaaggcgcgttc
aaaaactggggctacgaagtagcggagcaagagtttgcggaccaaaccttcacttggggc
caatacgaccgcatcaaggaagcggaaggcacagaagcggcgaacaaggctcagaaggaa
gcggaagctgcaggaaaaatcatcgtgaaggacgctatcgccgatatcgcgctgcagcaa
gttctgacccgtcctacggacttcgacgtgatcgcgacgcttaacctgaacggcgactac
ctgtctgacgcgctggctgctcaagttggcggcatcgggatcgcaccgggcgcgaatatc
aactacttgactggacatgctatcttcgaagcaacgcacggcacggctccgaaatatgcg
gatctcgacgtcgtaaacccagggtcggttattctgtccggcgttatgctgcttgagcat
cttggctggcaggaagcggctgacctgatctacaaagggatggaaacttcgatcaacaac
aaaaccgtaacgtatgacttcgcccgcctgatggaaggcgctacggaagttaaatgctcg
gcatttgcggacgaaatcatcaaaaatatgtag
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