Paenibacillus spongiae: L1F29_09100
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Entry
L1F29_09100 CDS
T09530
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspn03000
]
L1F29_09100
Transcription factors [BR:
pspn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
L1F29_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
TetR_N
HTH_23
HTH_31
HTH_3
AraC_binding_2
HTH_5
HTH_10
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UVI31953
LinkDB
All DBs
Position
complement(1995727..1996563)
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AA seq
278 aa
AA seq
DB search
MQTHGSIPSSHYGTLGIDTYVAGHFNQADTYFTLRPEGRTDWLITYTLSGEGYFKLGRST
YRTQAGDVALLKPGTPHHYGTSPGHKWNFIWTHFTPSPQDMPMWQFPEQQPGFYHTSIEN
AHSRERIAGALSRIIMDVRQRRPYWKMLCAGAIQELLLLLTQTASRNIDPRVEDALDLLT
KRMKEQVRVEDIAKEVGISESRLSHLFKSETGQSVIDALNRMRLREAAALLLHTHRSAAE
ISEDVGFGNYNHFLNQFKKRYGASPSAYRKYNFTARDE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgcatggcagtataccttcgagtcattatgggacattgggcatcgatacttac
gttgccggccattttaatcaagcagatacctacttcacccttcggcctgaaggcagaaca
gactggctcatcacatatacgttgtcaggggaaggctatttcaagctgggaaggtcaacc
taccgcacgcaggcaggcgacgtcgctttattgaaaccgggcacacctcaccattatgga
acaagtcccggccataagtggaatttcatctggacccatttcaccccaagcccgcaggat
atgcccatgtggcaattccctgagcagcagccgggcttctatcatacctccattgaaaac
gctcacagcagagagcgcatcgcaggagctttatcgcgaattattatggatgtccggcag
cgccggccctactggaagatgctctgcgcgggcgctatacaagaattgcttctcttgctg
acacagaccgcgtcgcgcaatatagatccgcgtgtggaggatgctctcgatttgctgacg
aaacggatgaaggagcaggtacgcgtggaggatatcgccaaggaagtcggcatctcggaa
tccaggctctcccatttgttcaaatcggagaccggtcaatccgtcattgatgctctaaac
cgtatgcgcttgagagaggcagccgcgcttctgctgcatacgcaccgcagtgcggccgaa
attagcgaggacgtcggattcggcaattacaatcatttcttgaatcaattcaagaaacgg
tacggagcgagtccaagcgcataccgcaaatataactttacggcgcgtgacgaatag
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