Paenibacillus spongiae: L1F29_09625
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Entry
L1F29_09625 CDS
T09530
Name
(GenBank) cytidine/deoxycytidylate deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00240
Pyrimidine metabolism
pspn01100
Metabolic pathways
pspn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
L1F29_09625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pspn02044
]
L1F29_09625
Enzymes [BR:
pspn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
L1F29_09625
Secretion system [BR:
pspn02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
L1F29_09625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
XOO_2897-deam
SNAD4
OTT_1508_deam
DUF5796
APOBEC4_like
NAD1
NAD2
Motif
Other DBs
NCBI-ProteinID:
UVI32049
LinkDB
All DBs
Position
2129078..2129608
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AA seq
176 aa
AA seq
DB search
METSPQDSVRKDWDTYFMDIAYMVSTRSRCPRRHVGAVLVQGKKLLGTAYNGAPMGVDDC
SEAGCMIVEEVELTMVDSEERMVKKQRCIRTIHAEQNLLMFTDRIDREGSTVYVTDQPCW
TCANMLANSGVKEIVYHRNYPKDSEKVVTLMTQKGIVFRNLAEYEPPAHSGMSVIS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgtcaccgcaagacagcgtgcgcaaagattgggacacctacttcatggatatc
gcttatatggtctcgacacgttcacgttgtccgcgcagacatgttggcgctgtcttggtc
caagggaagaagctgctgggcaccgcctataacggcgccccgatgggggtggacgattgt
tcggaagccggctgcatgattgtcgaagaggttgagctgacgatggtcgattcggaggag
cgcatggtcaagaagcagcgctgtatccgtacgatccatgcggagcagaacctgctaatg
tttaccgaccggatcgaccgggaagggtcgacggtctacgtgacggatcaaccttgctgg
acctgtgccaatatgttggccaacagtggtgtcaaagagatcgtctaccatcgcaactac
ccgaaggacagcgagaaagtggtaacgctgatgacacagaaggggatcgtctttcggaat
ttagccgaatacgagcctcccgcccattcgggcatgagtgtcatttcgtag
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