Paenibacillus spongiae: L1F29_10045
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Entry
L1F29_10045 CDS
T09530
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_10045
Enzymes [BR:
pspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F29_10045
DNA repair and recombination proteins [BR:
pspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L1F29_10045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
ResIII
AAA_30
AAA_22
Dna2
Motif
Other DBs
NCBI-ProteinID:
UVI32127
UniProt:
A0ABY5SHC9
LinkDB
All DBs
Position
2207732..2212006
Genome browser
AA seq
1424 aa
AA seq
DB search
MRTADYPKKPEGSTWTDDQWKAIVADGSNILVAAAAGSGKTAVLVERIIRKITADTDVDR
LLVATFTKAAAAEMKERIRIALEKELDKRPESEHLRRQLALMGRASITTLHSFCLDVIRK
YYSLIGLDPGFRIANQTEADLLRMDVLDALFEERYAEAEQHDTGFTELVERFGGERGDGP
LYALVMRLYQFSQSHPWPAVWLKETAAAFDVEDASGLGETQWVESLAGTVELALEGAERL
LLQALDVTRLPGGPDAYAATFNDDLAVIRMLRSRVDSTPWEAWHEAFRAAGFGKLKSQKG
DGVDKALQEQAKELRDMAKAVVADLQDEFFVRSPGEFAAELRDLAPLMHTLAGLAEEFGI
RFESAKREKGLLDFGDMEHYCLRILRDPSSTPGSAVPSAAALEYQAQFDEILLDEYQDTN
MVQEAIVTLIARSGEGNRFMVGDVKQSIYRFRLAEPNLFLRKYKAYGTDDGRRFFETLHR
EEAEDASTEISTKTALMTPLESAEPASSEEFGLRIDLARNFRSRQEVVDGTNGVFRAIMR
ETVAEMDYDERAELVCGASYPPAGDGGSPDRYAIEFALLDRGTGGDEPSSEQEAAADSSD
EEQPATMEDLQTVQLEARWIANRILQLKGLETPLHAHIDAPFEPYDGKRGSKRALAWRDI
VILLRADKQWAPVIIEELQAKGIPAYAELSSGYFEATEVETMLSLLRVIDNPYQDIPLAG
ALRSPVVGLTGEELALIRIAAGRLSYYDAVRKAEGDPSLPQGTRSKLSDFLSRLESWREE
ARQGALSELLWRIFRETGYYDLVGGMPGGLQRQANLRALHDRARQYEATSLRGLFRFLRF
IDRMRESGGDLGTARALGEQEDVVRIMSIHKSKGLEFPVVFVAGLGKLFNRQDLNSPFLM
HKELGFGPRFVDTELRVSYPTLPYLAIRERLRMESLAEEMRILYVALTRPKEKMFLVGTA
ADAAKLLQRWQASLDADGQLPDFRLAQAKRFLDWVGPLAMRDGIPLAVYEMEDEREGVET
ERFAARHEDRLVERLTLEGERSNDAIFEETGLEANKVVPFPSANPFLQWKKGVVPASLLG
MEAAAAVQTDEAAEAEFADRLQAVHELIPVFESPEEALEIERRLAWEYPYRTATQIPAKT
SVTEMKRLHAQTDLDDQSEVLLIPSSAGGTQASDTDRAGHGWNGEDAGSTGWDGANDQVE
QVELVFGEAFETAAVPEAETVFETEPFVKASGGGEYTFRLRRPKFMEEAALTAAERGTVS
HLVMQHIPLESQVDEQTVHDTVQRLLERRMLTELQAGAVNSEAVAAFFREEVGQRLLHAS
WVRRETPFSCTFPAERVYPQATESYGGEPILIQGVIDCLFRDEHGLVLLDYKTDRITMKQ
WDKAAERHRFQLTLYAEAVMRILGEPVDACYVYFFDGGRAVQLF
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagctgattatccgaaaaagccggaaggcagcacatggaccgacgatcaatgg
aaggcgatcgttgcggacggcagcaacattctggtggctgccgcggccggttccggcaag
acggcggttctcgtcgaacgcataatccggaagataacggccgatacggatgtagacaga
ctgctggtggcgaccttcacgaaggcggcggcggccgagatgaaggagcgaatccggatt
gcgctcgagaaggagctggacaagcgtccggagtcggagcatctgcgccgccagcttgcg
cttatgggaagagcgtcgattacgacgcttcactcgttctgcctggacgtcatccgcaaa
tattactcgctgatcggacttgaccctggctttcgcatcgcgaatcagaccgaggccgac
ctgctgcggatggacgtgctggacgccctgttcgaggagcgctatgcggaggctgagcag
catgataccggatttacggaattggtcgaacgattcggcggcgaacggggagacggcccg
ctgtatgcgctggtcatgaggctgtatcaattctcgcagagccatccgtggccggctgta
tggctgaaggaaacggcggcggcgttcgatgtggaggatgcctccgggctgggggaaacc
caatgggtcgaaagcttggccggtacggtcgagctggccttggaaggggcggaacgtttg
cttctgcaggcgctggacgtaaccaggctgccgggcggaccggatgcttatgcggctacc
ttcaatgatgatctggctgtgatccgaatgttgagaagccgtgtcgacagcacgccttgg
gaagcatggcatgaagctttcagggcggccggcttcggcaagctgaagagccagaagggg
gatggcgtcgataaggcgctgcaggagcaggcgaaggagctgcgcgatatggccaaggct
gtcgtcgccgacctgcaggacgaattcttcgtccgttcacccggggagttcgccgccgag
ctgcgggatctggctccgctgatgcatacgctggccggccttgccgaggagttcgggatc
cgcttcgagtccgctaaacgagagaagggtctgctcgattttggcgatatggagcattat
tgcctgcgcattctgcgcgatccgtcttcaacgcctggcagtgctgttccatctgctgca
gctttggaataccaggcgcagttcgacgaaatattgctcgacgagtaccaggataccaac
atggttcaggaagcgatcgttacgctgatcgcgcgctccggggaaggaaaccgtttcatg
gtcggcgatgtgaagcagagcatctacaggttccgtctggctgaaccgaatctgttcctt
cgcaaatacaaggcatacggaaccgatgacggtagacggtttttcgagacgcttcatagg
gaagaagcagaagacgcttcaaccgaaatttcaacaaagacggctctgatgaccccgtta
gaatcggcagagccggcctcaagcgaagagttcggcttgagaatcgatctggcgcggaat
ttccgcagccggcaggaggtcgttgacggaacgaacggggtattccgggcgatcatgcgc
gagacggtagcggagatggattacgatgagcgggctgagcttgtatgcggagcgtcatac
ccgccagcaggcgatgggggttctcccgatcgctatgcgattgagtttgcgctgctcgac
agagggaccggcggcgatgagccgtcttcggaacaagaagcggccgctgactcgtccgac
gaggagcagccggcgacgatggaggatctgcagaccgtgcagctggaagcgcgctggatc
gcgaatcggatcctgcagctgaaagggctggagacgccgctccatgcgcatattgatgcg
ccgttcgagccgtatgacgggaagcggggaagcaagcgcgcgcttgcctggcgcgatatc
gtcattctgctgcgtgcggacaagcaatgggctcctgttatcattgaagagctgcaggcg
aaagggataccggcttacgcggagctgagcagcggctactttgaagcgaccgaggtcgag
acgatgctgtcgctgctccgcgtcatcgataatccctatcaggatataccgcttgcaggt
gcgctgcgctccccggttgtcggattgacgggagaggagctggcgctcatccggatcgcg
gctggccgcttgtcatattacgatgccgtacgcaaggcggagggcgatccgtcgctgccg
caaggcacgcgaagcaagctgtcggacttccttagccgcctggagagctggcgcgaagag
gccaggcagggggcgctctccgagctgctgtggcgaatcttccgggaaaccggctattac
gatctggtaggcggcatgccgggaggactgcagcggcaggcgaatcttcgcgctctgcat
gatcgggcgcgccaatacgaggcgacatccctgcgcgggttattccgttttctccgcttt
atcgacaggatgcgcgagagcggcggggacttggggacggccagagcgttgggcgagcaa
gaggacgtcgttcgcatcatgtccatccataagagcaagggattggagttcccggtcgtc
ttcgttgccggtcttggcaagctgttcaacaggcaggacttgaacagcccgttcctgatg
cataaggagctgggcttcggaccgcgcttcgtggatacggagcttcgggtcagctatccg
acgctcccgtacttggccatccgggaacggctgcgcatggagtcgcttgcagaagaaatg
aggattctgtacgtagcgcttacgagaccgaaggagaagatgtttctcgtcggtacggcg
gcggatgccgccaagctgctgcagcgctggcaagcctccctcgatgcggacggacagctg
ccggatttccggcttgcgcaggcaaagcggtttctggattgggtcgggccgttagcgatg
cgagacggtattccgctcgcagtctatgagatggaagatgagcgagaaggcgtggaaacc
gaaaggtttgctgcgcgtcatgaagaccggcttgtcgaacgcttgacgctcgaaggcgag
aggtcgaatgatgccatattcgaggaaacgggtctggaagcgaataaggtcgtgcccttc
ccttcggcaaatccgttccttcaatggaagaaaggagtcgtcccggcatctttgctcggc
atggaagccgcggcggcggtacagaccgatgaggcggcggaagccgaattcgcagacagg
ctgcaggcggtccatgagctgataccggtattcgaatcgccggaagaagcgctggaaatc
gagcgccggctggcctgggagtacccgtaccggacggcaacccaaatacccgcgaagacg
tccgttaccgagatgaagcggctgcatgcgcagacggatctggacgatcagtcggaggtt
ctgctgatcccttcatcagctggcggaacgcaggcaagcgatacggacagagccgggcac
ggctggaatggagaagatgccggttcgaccggctgggacggcgccaatgatcaggtcgag
caggtggagctggtgttcggcgaagcgttcgagacagcggccgtaccggaggcggagacg
gtgttcgagaccgaaccgttcgtcaaggcgtcggggggcggcgaatatactttccgactg
agacgtccgaagttcatggaggaagcggcgctgacggctgccgagcggggaacggtcagc
catcttgtcatgcagcatatccctctggagagtcaagtggatgagcagaccgtgcacgat
acggtccagcgcttgctggaacgccgaatgctgacggagctgcaggccggggccgtcaat
tccgaagcggtggcagcgttcttccgcgaagaagtcgggcagcggctgctgcacgcgtcg
tgggtgaggcgggagacgccgttcagctgtacctttccggctgagcgggtctacccgcag
gcgacggagtcgtacggcggcgagccgatcttgatccagggggttatcgattgtctcttc
cgggacgagcacggccttgtcctgctggactacaagacggaccggataacgatgaagcag
tgggacaaagcggccgagcgccatcggttccagctgacgctttacgccgaggcggtcatg
cgtattctgggcgagccggtggatgcatgttatgtttatttttttgacggcggccgggca
gttcaactgttctag
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integrated database retrieval system
