Paenibacillus spongiae: L1F29_10050
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Entry
L1F29_10050 CDS
T09530
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_10050
DNA repair and recombination proteins [BR:
pspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L1F29_10050
Archaeal homologous recombinant proteins
L1F29_10050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF2379
Motif
Other DBs
NCBI-ProteinID:
UVI33603
LinkDB
All DBs
Position
2212073..2213284
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AA seq
403 aa
AA seq
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MRILHTADWHFGRSLEGRSRLEEQAAFVDELAEIVKDEAIDLVLLAGDVYDSVNPPAAAE
QLFYEALSRLADGGKRTVAVIAGNHDHPERVAASAPLASRSGIRLVGLPTDEPLIVDAAR
TGERAVIAALPYPSESRLRELLSEETDEAALRSAYSERVGALMNRLGASFRPDTVNLAMS
HIYVLGGLETDSERPIQVGGAYTVDPSALRVGAQYVALGHLHRPQRVAGDELMRYSGSPL
AYSFSEAGQAKSVTVFDAKPGQPVAPQELLLRSGRPLVRWQAKGGLEEVYRWLDEGRDAR
GWIDLDIWMTETMTLSHIQQLRRMHDGLIHIRPVYPEMVASDEEAGRPRDELPAEELFRR
FFAKQTGGAEPDAETVRLFLELIAEEADEAAAAYEPEEGGAGE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtattttacatacggcagactggcatttcgggcggagtctggaggggcgcagccgt
ttggaagagcaggcggccttcgtggacgagctagcagaaatcgtcaaagacgaagcgatc
gatctggtgcttctggcaggcgacgtatacgattcggtcaacccgcccgcggctgcggag
cagctgttctatgaagcgttgtcgcggctggccgacggcgggaagcggacggttgcggtt
atagcgggcaatcatgaccatcccgagcgggtggcggcttccgccccgctggcatcgcgc
agcggaattcggcttgtaggcttgcctaccgatgagccgctaatcgtagatgcggcccgc
acgggagaacgcgccgtaattgcggcgcttccttatccgtcggaatcgcggctgcgcgag
ctgcttagcgaggagacggacgaagcggcgctgcggagcgcctattcggagcgtgtcggc
gctctaatgaaccggctgggcgcatcattccgcccggacacggtcaatttggcgatgagc
cacatctatgtgctcggcggtctggagaccgattcggagcggccgatccaggtgggcggg
gcctatacggttgatccatcggcgctgcgcgtcggcgctcaatatgtggcgcttggccac
ctgcaccgtccgcagcgtgtcgccggcgacgagctgatgcgctacagcggctcgccgctt
gcctacagcttctcggaagccggacaggccaaatcggttacggtgttcgacgccaagccg
gggcagccggtcgcgccgcaggagctgctgcttcgcagcggcagaccgcttgtccgatgg
caggcgaagggcggcctggaggaggtctaccgatggctcgacgaaggccgcgatgccaga
ggctggatcgatctggacatctggatgacagagacgatgacgctgtcgcatattcaacag
ctgcggcgtatgcacgatggcctcattcatatccgccccgtatatccggagatggtcgct
agcgatgaagaggccggcagacctcgcgacgagctgcctgcggaagagctgttccgccgg
ttcttcgcgaagcagaccgggggggcggagcccgatgcggagacggttcggctatttctg
gagctgattgccgaagaggcggatgaagcggctgctgcatatgagccggaggaaggaggg
gcaggcgaatga
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