Paenibacillus spongiae: L1F29_10380
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Entry
L1F29_10380 CDS
T09530
Name
(GenBank) PASTA domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00550
Peptidoglycan biosynthesis
pspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L1F29_10380
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
L1F29_10380
Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
L1F29_10380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
UVI32190
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All DBs
Position
2276282..2278546
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AA seq
754 aa
AA seq
DB search
MTKRIKLRTLLVGGLITLFFVILMGKTFWVQVVKADFWTEKARNTWSTSETLVPVRGTIS
DRDGNVLAMDTAAYTVAVNPKIIHELGIEDFVVSKLHLILGKPESELREIVTAKKDDGTY
YTQREVRREGWKIDKSVRDRIVNFRDELEKQTKKKDVGIYLIEQQKRYYPKHELAAHTIG
YVDRDGKAITGLEAYLDDELKGVEGKINYKRDGNGIILENEKVEFKPSRDGKNVKLTIDA
DIQHYVQEAIQEAYDKYQPKSITAIAADPDTMEILGMANLPTYNPNEYGKSPQANFYNHA
IKSEYEPGSTFKIVTLAAAVEEGVFNPNEEYESGRIKVGNQTLRDVKREGWGTISFLEGL
KRSSNVAFVKLGYERLKTDKMIQYIKDFGFGQKTGIELPGEIPGKMNINPNRPVEVATAT
FGQGPVTVTPIQQIAAVAAVANGGKLMQPHIIKEIEDPVTNKTEVVKPKVVRQVISEKTS
KQVGEYLEQVVSDQKIGTGKNAYIPGYRVAGKTGTAQKVIAGKKGYSDEKYVVSFIGYAP
VDNPKIIVYVVVDEPNDKYAGGGSVAAPVFKKIVQQSLRQMNVMPDLPVDPETKKSSKQK
ELTVAVPDLSGLGLSQAKSKLKSSTLVAEVVGSGTAVKQQIPKAGTETSPNQKVYLITED
RDKLPIPNMRGLPLRDALEICSLLNIRTVTEGQGYVTNQIAAMKDGERVLKLILTPPGPL
EQTDESGDGGSDQGADKAANSAADNAEDQEDRQE
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatcaaattacggacgttgctggtcggagggcttatcaccctctttttt
gttattttgatgggtaaaaccttctgggtacaggtggtaaaggctgatttctggacggag
aaggcgcgcaacacctggtcgacatccgaaacgctcgtgccggtgcgggggacgatcagc
gaccgggacggcaacgtgctcgccatggatacggccgcttatacggtggcggtgaatcct
aagatcatccacgagctcggcatcgaagattttgtcgtgagcaagcttcatcttatattg
gggaagccggaatcggagctgcgcgagatcgtaacggcgaagaaggatgacgggacgtat
tacacgcagcgcgaggtgaggagagaaggctggaaaatcgacaaatcggtgagagaccgg
atcgttaattttcgggatgagctcgagaagcaaaccaagaagaaagacgtcggcatttat
ttgatcgaacagcagaagcgctattatccgaagcatgagctggccgcccatacgatcggc
tatgtagatcgggatggcaaagccatcacgggactcgaagcttatttggatgacgagctg
aagggcgtggaaggcaagatcaattacaagcgcgacggaaacggcatcatcctagagaat
gagaaggtcgagttcaaaccgtcgcgcgatggcaagaatgtgaagcttacaatcgatgcc
gacatccagcattatgttcaagaagcgattcaagaagcttacgataagtatcagccgaag
agcattacagccatcgcggccgacccggatacgatggaaattctcggcatggcgaacctg
cctacctataacccgaatgaatacgggaaatcgcctcaggccaacttctacaatcatgcc
atcaagtcggaatacgagccggggtccacattcaagatcgtgaccttggctgctgccgtc
gaagaaggggtatttaacccgaatgaggagtatgaatccggtagaattaaagtcggcaat
cagactctgcgggacgttaagcgcgagggttgggggaccatcagttttctggaggggctg
aaacgttccagtaacgtcgcctttgtcaagctggggtatgagcggttaaagacggataag
atgatccagtatattaaggatttcgggttcggccagaagaccggcattgagctgcccggt
gaaattccaggtaaaatgaacattaatcccaatcggccggtagaggttgctaccgcaacc
ttcggacaagggccggtgaccgttacgccgattcagcagatcgcggcagtagccgcggtg
gccaacggcgggaaattgatgcagccgcatatcatcaaagaaatcgaggatcccgtcacg
aataagacggaggtcgttaagccgaaggtcgtccggcaggtcatctccgagaagacgtcc
aagcaggtcggcgaatatttggagcaggtcgtctccgatcagaagatcgggaccggtaag
aatgcgtatatcccgggataccgggtagccggtaaaaccggtacagcgcagaaggttatc
gcgggcaagaaagggtactccgacgagaaatacgtcgtatccttcatcgggtatgctcca
gtcgacaatcccaagatcattgtctatgtcgtcgtcgacgaaccgaacgacaaatatgcg
ggcggcggctccgtagcggcgccggtattcaagaagatcgtgcagcaaagccttcgccag
atgaatgttatgccggatttgccggtcgatccggagacgaagaagtcgtcgaagcagaag
gagttgacggttgccgttcccgatctgtccggacttggcctcagtcaagcgaagtcgaag
ctgaaatcaagtacgctagtggcggaggtcgtcggctcgggtacggctgtcaagcaacag
attccgaaggccggtacggaaacgagcccgaatcagaaagtctacctgatcacggaggat
cgcgataagctcccgattccgaatatgagaggattgcctttgcgcgatgcgcttgagatc
tgcagcttgcttaacatccgcaccgttacggaaggccagggctacgtgacgaaccagatt
gccgccatgaaggatggcgaacgcgtgctgaagcttattctgactcctcctggaccgttg
gaacagacggacgaaagcggagatgggggcagcgatcagggggcagataaagcggctaat
agtgctgcggataatgcggaagaccaagaagatagacaggaataa
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