Paenibacillus spongiae: L1F29_10405
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Entry
L1F29_10405 CDS
T09530
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00470
D-Amino acid metabolism
pspn00550
Peptidoglycan biosynthesis
pspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L1F29_10405 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L1F29_10405 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
L1F29_10405 (murD)
Enzymes [BR:
pspn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
L1F29_10405 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pspn01011
]
Precursor biosynthesis
Amino acid ligase
L1F29_10405 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
UVI32195
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Position
2285006..2286442
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AA seq
478 aa
AA seq
DB search
MNDPKSYKDRQVVVLGLARSGVSVAKLFHKLGALVTVNDQQERHLCPEADELDALGVSVI
CGGHPDSLITKDTALVVKNPGIPYTAAPVKRAMELGLDVVTEVEVAYWLSPAPIIGITGS
NGKTTTTTWIGELLDSAQLRPIVAGNIGTPLCEAAQTAEPGDWIVAELSSFQLKGTQSFR
PRVALLLNIAETHLDYHDGIEDYIASKEKLFANQTEEDTAVLNADDPVCRELMDKGTIRA
KILPFSTTQELSQGIFISPPFPTDLTEPDGEVLRQIVWKKQDGVTQTIMPVNELGLPGRH
NAANALAAIAACIAAGADPKSLLQPLRDFNGVEDRLEFVCERKGVKYYNDSKATNSVATI
IALRSFPGRIVLIAGGRDRGLDFMELVPHMRDQVKGIVTIGETREKLAAVARLAGLSAVK
IVEPVEDAEATLHLAVREAASIAEPGDIVLLSPACASWDMFKSYEQRGRIFKQSAHTL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccgaaatcttataaggaccggcaagtcgttgtactcggtcttgccagaagc
ggcgtcagcgttgccaagctttttcacaagctcggcgcgctggtgaccgttaacgatcaa
caggaacgtcatctatgccccgaagcggacgagctggacgctttgggtgtttctgtcata
tgcggagggcatccggattcgcttattacgaaggatacggcgctagtcgtcaagaatccg
ggcatcccatatacggctgctcccgttaaacgggcgatggagctggggctcgacgtggtg
acggaagtggaggtcgcctactggctgtcgccggctccgattatcggcatcaccggctcg
aacggcaagacgacaacgacgacttggatcggcgaactgctcgattcggcccagctgagg
ccgatcgtagcaggcaatatcggcacgcctctatgcgaagcggcccaaacagcggaaccg
ggcgattggatcgttgccgagctgagctccttccagctgaaaggaacgcagtcgttccgt
ccgcgcgtggcgctgctgctcaatatcgcggagacgcatttggattaccatgatggaatc
gaagattacatcgcatccaaggagaagctgtttgcgaatcagacagaggaagacacggcc
gtgctgaacgccgacgacccggtctgccgcgagctgatggacaaagggacgatccgggct
aagatcctgccgttctccacgactcaggagctctcgcagggcatcttcatatcgccgccg
tttccgaccgatctgacggagcctgacggcgaggttctgcggcagatcgtgtggaagaaa
caagacggcgtgacgcagacgataatgcctgtgaacgagctgggccttccagggcgtcac
aatgccgccaacgcactagctgcgatagcggcttgcatcgctgcgggcgccgatccgaag
tcgctgctgcagccgcttcgcgatttcaacggcgtcgaggatcggctggagttcgtctgt
gaacgaaaaggggtcaaatattacaacgactctaaagcgaccaattcggtcgcaaccatc
atagcgcttcgttcgtttcccggccggatcgtcctgattgccggcggacgcgaccgaggt
ttggatttcatggagctggtgccgcatatgcgcgatcaggtgaaagggatcgtaaccatc
ggcgaaacccgcgagaagctggcggccgtggcgaggctggcaggtttatcggcggtgaaa
atcgtcgaacctgtggaggacgccgaagcgacgctgcatctagcggtgcgcgaagccgcc
tccattgccgagcctggcgatatcgttctgttatccccggcctgtgcgagctgggatatg
tttaagtcttacgagcagcgggggcgcatttttaagcaatcggcgcatacgttgtaa
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