Paenibacillus spongiae: L1F29_10630
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Entry
L1F29_10630 CDS
T09530
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L1F29_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_10630
Enzymes [BR:
pspn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L1F29_10630
DNA repair and recombination proteins [BR:
pspn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L1F29_10630
Prokaryotic type
L1F29_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UVI32233
LinkDB
All DBs
Position
2334166..2334876
Genome browser
AA seq
236 aa
AA seq
DB search
MRAIFKNDWATILNEEMEQPYYKQLRAFLAEQYRHKTIYPSMHDIFNALHYTSYEDTRVV
ILGQDPYHGSGQAHGFSFSVQPGVKSPPSLQNIFKELKEDLGCPVPDHGYLLPWAKQGVL
LLNNVLTVEAGLAASHQGNGWERFTDAVIAALNERERPIVFILWGKHAQEKASSIDLDRH
CIITSPHPSPFAAHRGFFGSRPFSRTNAFLRRIGSPEIDWCIPALASLEAAADSSQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctatttttaagaacgattgggcgactatcttaaatgaggagatggagcagcct
tattataaacaattgcgtgctttcttagctgaacaataccggcataaaaccatttatccg
agcatgcatgatatttttaacgcgcttcattatacgtcctatgaggatacgcgtgtcgtc
attctgggtcaggatccttatcacggatcgggtcaggctcacgggttcagcttctcggtc
cagccgggcgtgaagtcgccgccgtcgctgcaaaatatttttaaagagctgaaggaagac
ctgggatgtccggttcccgaccatgggtatctgctgccatgggccaagcagggggttctg
ctgttgaataatgtgctgacggtagaggctggcttagcggcatcgcatcaagggaacggc
tgggaaaggttcacggatgccgttattgccgcgttaaacgagcgcgagcggcccattgta
ttcattttatggggcaagcatgcgcaggagaaagcttcttcgatcgatttggaccgtcac
tgcatcatcacatccccgcacccgagtcccttcgccgcgcatcgcggcttcttcggcagc
cgcccgttctcgcggacgaacgccttcctgcgtcggatcggcagtccggagatcgattgg
tgcataccggcgctggcttctcttgaagcagctgcggatagctcacaataa
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integrated database retrieval system
