Paenibacillus spongiae: L1F29_10980
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Entry
L1F29_10980 CDS
T09530
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspn03009
]
L1F29_10980
Enzymes [BR:
pspn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
L1F29_10980
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
L1F29_10980
Ribosome biogenesis [BR:
pspn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L1F29_10980
23S rRNA modification factors
L1F29_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_23
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UVI32301
LinkDB
All DBs
Position
2398739..2399563
Genome browser
AA seq
274 aa
AA seq
DB search
MKIEKERIDILLVEQGYYESREKAKAALMAGLIIVDGERIEKSGTKVPRSASITVKGALH
PYVSRGGLKLEKAIRAFELDLTGAVMLDIGASTGGFTDCALQNGASYVYAIDVGYNQLDW
SLRQDERVNVMERTNFRYMQPADLQGPQPTFATIDVSFISLKIILATLVQLLHEGSGVVA
LIKPQFEAGRDKVGKSGVVRDPAVHRAVLRTILAFAAEQGLSLRQVTFSPITGGEGNIEF
LAYWVLEPEAAAAAPGDDFLAKLVEEAGQTFAQA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgagaaagaacgaatcgatattttgttagtggagcaagggtattacgagagc
agagaaaaggcgaaagccgctctgatggcgggtctcattatcgtcgacggggaacggatc
gagaagagcggcacgaaagtgccgcgatccgcatccatcacggtaaaaggagcgcttcat
ccttatgtcagccgcggcggcttgaagctggagaaagcgatccgcgccttcgagctggat
ctgaccggagccgttatgctggatatcggcgcttcaaccggcggctttacggattgcgcg
cttcagaacggcgcctcctacgtttatgccatcgatgtcggttacaatcagctggattgg
tcgctccgtcaggatgagcgggtaaatgtcatggaacgcacgaacttcaggtatatgcag
ccggccgaccttcaaggaccgcagcctacatttgcgacgatcgatgtttccttcatttcg
ctaaaaattattttggcgacgctggtgcagctgctgcacgaaggatccggtgtcgtagcg
ctgattaaaccgcaattcgaagcggggcgcgataaggtgggcaaatccggcgtcgtgcgc
gacccggctgttcacagagcagtcctccggacgatcctggccttcgcggccgagcagggc
ttgtctctgcggcaggttacattctccccgattacaggaggggaagggaatatcgaattc
cttgcgtattgggtgctggagcccgaagcggcggccgcggcgccgggagacgacttcctc
gccaagcttgtcgaggaggcgggccagacctttgcgcaggcttga
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