Paenibacillus spongiae: L1F29_11365
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Entry
L1F29_11365 CDS
T09530
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
L1F29_11365 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pspn03011
]
L1F29_11365 (rpsA)
Ribosome [BR:
pspn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
L1F29_11365 (rpsA)
Bacteria
L1F29_11365 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
RNase_II_C_S1
S1_2
DUF2110
Endonuc_BglI
Motif
Other DBs
NCBI-ProteinID:
UVI32371
LinkDB
All DBs
Position
2470145..2471395
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AA seq
416 aa
AA seq
DB search
MSEETNVQETAAAETISQEAMDNFVSVKKGDTVKGTIVKIEDNQVFVSLGYKYDGVIPLR
ELSSIQLDNAAEAAEVGQEVELKVVSIDDEKEKLVLSKRQIDGERAWDELQSRFDNGVVF
EVTVADVVKGGLVADIGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKEIDRENNKVILS
QKEVLDAEFEQNKQKIMSELQVGQELEGTVQRLTPFGAFVDIGGIDGLVHVSELSWQHVA
HPKDIVSEGQSVRVKVLKVDPALGKISLSMKAAEPGPWETAGDKFNTGDIVTGTVRRIVT
FGAFVEIAPGVEGLVHISQLAHRHVATPHEVVTEGQEVKAKVLDFNPAEKRVSLSIKETE
EAPEQAPRAERAPRGDRDRDRGPKIEKIDNPNVSLSNEGMSFTLAERFGDKLSKLK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaacaaatgtgcaagaaaccgcagcagcggaaacgatcagccaagaagca
atggataatttcgtgtccgttaagaaaggcgacacggtaaaaggtacgatcgtcaagatt
gaagataaccaagtgtttgttagccttggatataaatatgacggcgtcattccgcttcgc
gaattatcctcgattcagctggacaacgcagctgaggctgctgaagtcggccaagaagtc
gagctgaaagtggtaagcatcgatgacgagaaggagaagcttgtcctttccaaacgtcaa
atcgatggcgagcgcgcttgggacgaacttcaatcccgtttcgacaacggcgtagtgttc
gaagtaacagtagccgacgtcgtaaaaggcggactcgtcgcggatatcggtgttcgcgga
ttcattcctgcatccatggttgagcgtcacttcgtagaagatttcagcgattacaagggg
cgtacgcttcgcgtaaaagtgaaagaaatcgaccgcgagaacaataaagtgattctctcc
cagaaagaagtgctcgatgccgaattcgagcaaaacaagcaaaaaattatgagcgagctt
caagtaggccaagagcttgaaggcaccgtgcagcgtttgacgccattcggcgcattcgta
gatatcggcggaatcgacggactggttcacgtttccgagctttcttggcagcatgttgcg
catccgaaggacatcgtttccgaaggtcaatcggttcgcgtgaaggttctgaaggtagat
ccggcattgggcaaaatcagcctcagcatgaaagcagccgagcctggtccttgggaaacg
gctggcgacaagttcaataccggcgatatcgttaccggtacggtccgccgtatcgtaacg
ttcggtgctttcgttgaaatcgctcctggcgtcgaaggtctggtacacatctctcaactg
gctcaccgccatgtggcaacgccgcatgaggtcgttactgagggtcaggaagttaaagcg
aaagttctcgactttaacccggccgagaagcgcgttagcttgagcatcaaagaaacggaa
gaagcgcctgaacaagcgccaagagccgaaagagctccacgcggcgatcgtgaccgcgac
cgtggaccgaaaatcgagaaaatcgacaatccgaacgtaagcctgagcaacgaaggcatg
agcttcacgttggctgaacgtttcggcgataaactgagcaaattgaaataa
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