Paenibacillus spongiae: L1F29_11430
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Entry
L1F29_11430 CDS
T09530
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspn03032
]
L1F29_11430
03036 Chromosome and associated proteins [BR:
pspn03036
]
L1F29_11430
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_11430
DNA replication proteins [BR:
pspn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L1F29_11430
Chromosome and associated proteins [BR:
pspn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L1F29_11430
DNA repair and recombination proteins [BR:
pspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L1F29_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Rpf1_C
HU-CCDC81_euk_1
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
UVI32384
LinkDB
All DBs
Position
2481569..2481844
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AA seq
91 aa
AA seq
DB search
MNKTELIAKVAELTDLSKKDASKAVDAVFDAISDALQGGDKVQLVGFGNFEVKSREARKG
RNPQTGQEIDIPASKIPSFKAGKSLKDLVSQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacggaactaattgcgaaagtggctgaattgaccgacctttccaagaaggac
gcttcgaaagcggttgacgctgtattcgatgcgatctccgacgcactgcaaggcggggac
aaagttcaactcgtcggcttcggaaacttcgaggtgaaaagccgcgaagcccgtaaagga
cgcaatccgcaaacaggtcaggaaatcgacattccagcgagcaagatcccttcgttcaaa
gcgggtaagtcgctgaaagatctggtatcccaataa
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