Paenibacillus spongiae: L1F29_12270
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Entry
L1F29_12270 CDS
T09530
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1F29_12270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspn03019
]
L1F29_12270 (pnp)
03016 Transfer RNA biogenesis [BR:
pspn03016
]
L1F29_12270 (pnp)
Enzymes [BR:
pspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L1F29_12270 (pnp)
Messenger RNA biogenesis [BR:
pspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L1F29_12270 (pnp)
Transfer RNA biogenesis [BR:
pspn03016
]
Prokaryotic type
tRNA degradation factors
L1F29_12270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UVI32548
UniProt:
A0ABY5SJW9
LinkDB
All DBs
Position
2640744..2642846
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AA seq
700 aa
AA seq
DB search
MLHRVEMTLGGRPLILETGRLAKQANAAVTVRYGETVILCTVTASNEPKNLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNEVQVANIVMSVDQD
CPPEIAAMIGTSAALSISDVPFNGPIGGVIIGRIDGKFIINPTVEEEAKTDIFVTVAGTR
DAIMMVEAEANEVSEEVMLEAIMYGHEEIKKIVTVIEELQQIAGKPKMEVQLHAVDNEVD
KQVRAYAADRLVEAVRIHEKHARQDAIDAVNAETVAHFEVEYAETPELLGDVKESLYDIV
KEEVRRLITHDKVRPDGRGLSEIRPIECDVALLPRTHGSGLFTRGQTQALSICTLGALGD
VQILDGIDLEETKRFMHHYNFPPFSVGEARPLRPPGRREIGHGALGERALAKVIPSEAEF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGNHVSVLSDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIDGISREILSEALEQAREGRMHILGKMTEVM
QAPRTALSPYAPKIVIMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGKVFIASSN
QEANERAKQIIEGIVREVVVGEVYLGTVKRIEKFGAFVEILPNKDGLVHISQVSTERVAK
IEDVLKIGDQITVKVTEIDQQGRINLSRKAVLAAQEPAKS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcatcgtgttgaaatgacgctcggcggccgtccgttgattttggaaacgggccga
ctggccaagcaagccaatgcggcggttaccgtacgctacggtgaaaccgtcatcctatgt
acagtcacggcgtccaacgaacctaaaaatttggactttttcccgttgacagtgaactat
gaagagcgactttatgcagtcggcaaaattccggggggcttcattaaacgtgaaggccgt
ccgagcgagaaggcgattttggcgagccgtctgacggaccgtccgatccgtccgttgttt
ccggaaggattccgcaatgaagtacaggttgccaatatcgtcatgagcgtcgatcaggat
tgcccgccggaaatcgcggctatgatcggtacatcggcggcgctttcgatctccgatgtt
ccattcaacggtccaatcggcggcgttattatcggccggatcgacggaaagttcattatt
aacccaaccgtcgaagaagaggccaagacggatatcttcgttacggttgcaggtacgaga
gatgccatcatgatggtggaagccgaggcgaacgaggtttccgaagaggtcatgctggaa
gcgatcatgtacggccatgaagaaatcaagaagatcgttacggtaatcgaagagctgcag
caaatcgccggcaagcccaagatggaagtgcagcttcatgcggtggacaatgaagtggac
aagcaggtgcgcgcctatgcggcggatcgtcttgtagaagccgtacgcatccatgagaag
catgcgcgtcaagatgcgatcgatgcggtgaatgcggaaacggtcgctcactttgaagtg
gaatatgcggaaacgccggagcttcttggcgatgtcaaagaatcgctctatgatatcgtg
aaagaggaagtgcgccgactgatcacgcacgataaagtgcgtccggacggacggggatta
agcgagatccgcccgatcgaatgcgatgtggcgctgctgcctcgtacgcacggatccggt
ctatttacgcgcggccagacgcaagcgctcagtatttgtacgcttggtgcgcttggtgat
gtgcaaattttggacggcatcgacctggaagaaacgaaacggttcatgcaccattacaat
ttcccgccgttcagcgttggcgaagcaagaccgctccgtccgccgggacgccgcgagatc
ggtcatggcgcattgggtgagcgcgcgctggcgaaggtcattccatccgaagcggaattt
ccgtacacgattcgtctcgtttccgaagtattggaatcgaacggctcgacgagccaagcg
agtatttgcgcaagcacgctggcgatgatggatgcgggcgtgccgattaaggcgccggtt
gccggcgtggcgatgggacttattaaagatggcaaccatgtatcggttctgtccgatatt
caagggatggaagatcatcttggcgacatggactttaaagtagcgggtacggccgaaggc
gtaacagccatccaaatggatatcaaaatcgacggcatcagccgcgagattctgagcgaa
gcgctggagcaggcacgtgaaggacgcatgcacatcctcggcaaaatgacggaagtcatg
caggcgcctcggacagctttatcgccatatgcgcctaagatcgtgatcatgcaaatcaat
ccggacaaaatccgtgacgttattggcgccggcggcaagatcatcaataagatcattgaa
gagaccggagtcaaaatcgatatcgagcaggacggcaaagtattcatcgcttcctcgaat
caagaggcgaacgagcgtgcgaagcaaattattgaaggtatcgtacgcgaggtcgttgtc
ggcgaggtttacctcggaacggtcaaacggatcgagaaattcggcgcattcgttgaaatc
cttccgaacaaagacggtctggtacacatctcgcaagtttccactgagcgggtagccaag
atcgaggatgtcctcaaaattggcgatcaaattacggtaaaggttaccgaaatcgatcag
cagggccgcatcaacctctcacgcaaagcggtattggctgcgcaagagccggccaaatct
taa
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