Paenibacillus spongiae: L1F29_12435
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Entry
L1F29_12435 CDS
T09530
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspn03016
]
L1F29_12435 (miaB)
Enzymes [BR:
pspn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
L1F29_12435 (miaB)
Transfer RNA biogenesis [BR:
pspn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
L1F29_12435 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UVI32578
LinkDB
All DBs
Position
2677550..2679145
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AA seq
531 aa
AA seq
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MTKGNNNTSDMQPGEETKDYSKYFDFSGAKIVKEEDGSTTYRIKGRDITINSTPSYKDEK
RRGKEDIHVHYEFAIPDDMKTFGKGKSYLIYTYGCQMNEHDTEVMKGLFEQMGYVSTEDR
NQADVILLNTCAIRENAEDKVFGELGHLKHLKTEKPDLILGVCGCMSQEESVVGRILQKH
SFVDLIFGTHNIHRLPHLLQNAMFSKEMVVEVWSKEGDIIENLPKKREGMRAWVNIMYGC
DKFCTYCIVPYTRGKERSRRPEDVIAEVRELARQGFKEVTLLGQNVNAYGKDFTDIEYLF
GDLMADLNKIDIPRIRFTTSHPRDFDDHLIEVLARRGNLVEHIHLPVQSGNSAVLKRMRR
NYTREMFLELVRKIKQAIPDAMLTTDIIVGFPGETEEQFQETLSLVREVGFASAYTFIYS
LREGTPAAKLEDNVPIEVKKDRLYRLNELIGELSRADNEAQRGEIVEVLVEGESKNNANV
LSGRTRTNKLVLFEGPKEWIGEFVHVKLTEPQTWYIKAEPVRAPERQEAVS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggggaataacaacacttcggacatgcagcccggcgaggaaacgaaggactac
tccaaatattttgacttctcgggcgcgaagattgttaaggaagaagacggcagcaccaca
taccggattaaaggccgcgatattaccattaattccacgcccagctataaagacgagaag
cgccggggcaaggaagatattcatgttcactatgaatttgcgataccggatgatatgaag
acgttcggcaaaggcaaatcctatttgatctatacgtacggctgtcagatgaatgagcat
gacacggaagtcatgaaaggcttattcgagcagatgggctacgtatcgaccgaagaccgg
aaccaagccgatgtcatcttgctcaatacttgcgcgatccgggagaatgccgaagataaa
gtattcggagagctcggacatctcaagcatctaaagaccgagaaaccggatctcatcctc
ggcgtgtgcggttgtatgtcgcaggaggaatcggttgtcggccgtattctgcagaagcat
tccttcgtcgacctgatcttcggcacgcataatattcaccgtctgccgcatctgcttcag
aacgcgatgttcagcaaagagatggtcgttgaagtatggtccaaggaaggcgacattatc
gagaatttgcccaagaagcgcgaagggatgcgggcttgggtcaatattatgtacggatgc
gataagttctgtacgtactgtatcgtgccttacacgcgcgggaaggagcgcagccggcgt
ccggaggacgtgatcgctgaagtccgcgagctggcccgccagggctttaaagaggttacg
ctgctcggacagaacgtgaacgcgtacggcaaggattttacggatatcgaatacctcttc
ggcgatttgatggccgatcttaacaagatcgatattccgcgcatccggttcacgacgagc
catccgcgggatttcgacgatcatttgatcgaggtgctggcaaggcgcggcaacctggtg
gagcatattcatctcccggtacaatcgggcaactccgccgtcctcaagcggatgagacgc
aattatacgagagagatgtttctggagctggtacggaaaatcaagcaagcgattccggat
gcaatgctgacgacggatattatcgtgggcttcccgggcgagacggaagagcagttccag
gaaacattatcgctcgtcagagaagtcgggttcgcctcggcttatacgttcatctattcc
ttgcgcgaagggactccggctgcgaaattggaagataacgtcccgattgaagtgaagaaa
gaccgtctctatcggctgaatgaactgattggggagctgagccgcgccgacaacgaggcg
cagcgcggtgagattgtcgaggtcctcgtcgaaggagaaagcaagaacaatgcgaacgtt
ctgtcgggacgtacacggacgaacaaattggttctcttcgaagggccgaaggaatggatc
ggcgaattcgttcacgtcaagctgaccgaaccgcaaacctggtatatcaaagcagaaccg
gtccgcgcacccgaaaggcaagaggccgtttcttaa
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