Paenibacillus spongiae: L1F29_12745
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Entry
L1F29_12745 CDS
T09530
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03420
Nucleotide excision repair
pspn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1F29_12745
03430 Mismatch repair
L1F29_12745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_12745
Enzymes [BR:
pspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F29_12745
DNA repair and recombination proteins [BR:
pspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1F29_12745
MMR (mismatch excision repair)
Other MMR factors
L1F29_12745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
AAA_30
SLFN-g3_helicase
AAA_16
PhoH
DUF7041
NACHT
DDHD
DEAD
Motif
Other DBs
NCBI-ProteinID:
UVI32632
LinkDB
All DBs
Position
2749091..2751451
Genome browser
AA seq
786 aa
AA seq
DB search
MSEATQEWKSEQQRVDQVVQEIDSRTVTLEQQTSEARSEMVEIRKNFWEDVTVNFEDAAE
MAETAASLKQQAEMLFDREHAHRQSDKQLRTLRKLRQSPYFGRIDFALEGESAADPIYLG
IASLRDSSDTDYLIYDWRAPVSSLYYDYPPGPAQYETPMGIIGGELKLKRQFVIRDGVIT
SVFDTGVTIGDEMLQEVLGKHSDAQMKSIVATIQREQNLIIRNDRSRLLVVQGAAGSGKT
SAALQRVAYLLYRHRGTLSADQIVLFSPNPMFNSYVSTVLPELGEENMEQTTFQDYLHYR
LSKSFQLENPYEQLEYALAATDDSGYEARMESIRYKASRTFVELMERYLASLKEGGLIFR
NLSFRGEPFIHARDIHDYFYSLDRSIPIPNRLRLVAERLMEKVKERQIAALDESWVEDEI
ELLDKETYLNIYQQLRRKKRFHKESFDDFDAEKAMLAEYVVRDRFKPLRERVKRLNFINL
KAVYRQLFADPAFAAAYLEDEDTLPASWDAICARTLERLDDGAMAYEDATPFLYAVERIR
GFQTNVSVRHILIDEAQDYTAFQFAYLKRLFPRAKVTALGDMNQSINAHASLGGSGFSAI
EALFDPEETEKVTLMRSYRSTRPIVEFTSLLIPGGEAIEPFNRSGDKPTLTAVHNITELN
SRIAARIEALQAEGYRTIAVICKTAAESRTAYEALQENIDIRLMERETTDFEQGVVVIPS
YLAKGVEFDAVIVYDASARCYGRESERKLFYTVCTRAMHELHLYGVGEWSPFMTDEAKQC
CTLEEE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcgactcaagagtggaaaagtgaacagcagcgggtcgatcaggttgttcag
gaaattgacagccgaacggttacactggagcagcaaacctccgaagccagaagcgaaatg
gttgaaatccgtaaaaatttctgggaagacgtcaccgtcaacttcgaggatgcggcagag
atggccgaaaccgccgcaagcctaaagcagcaggccgagatgctcttcgaccgcgagcac
gcgcaccgtcagagcgacaagcagctgcggacgttaagaaagctccggcagtcaccgtat
ttcggacgaatcgattttgccctggaaggggagtccgcggccgatcccatctatctgggc
atcgcttcgctgcgggatagcagcgatactgactacctcatttatgattggcgtgcgccc
gtctccagcctgtattacgactatccgccgggaccggcgcagtacgaaacccccatggga
ataatcggcggcgaattgaagctgaagcgccaattcgtcatacgggacggcgtcattacc
agcgtattcgataccggtgttacgatcggcgacgagatgcttcaggaagtgctcggcaag
cattcggatgcgcagatgaagagtatcgttgccactattcagcgcgagcaaaatttaatt
atccgtaatgaccgcagccggcttctcgttgttcagggagcggccgggagcggcaaaacc
tcggcagcgcttcagcgggtcgcttatttgctgtaccggcatagaggaaccctgagtgcc
gaccagattgtcctcttctcgccaaatccgatgttcaatagttatgtatcgaccgttctg
cctgagctgggcgaagagaatatggagcagacgaccttccaggactatttgcactatcgg
ctgagcaagtcgttccaattggagaatccgtacgagcagctcgaatacgctttagccgca
acagatgactctggttatgaggcccggatggagagcatccgatacaaagcatcccgtacg
ttcgtggaattaatggagcgttatctagcctctttgaaggaaggcgggcttatcttccga
aacttgtccttccgcggggagcccttcattcacgcgagggatatacacgattatttctac
tcgcttgatcgttcgattccgattccgaaccgtcttcggctcgtcgccgagcggttaatg
gagaaggtaaaggagcgtcagatagccgcgcttgacgagagctgggttgaagatgaaatc
gagctgctggataaggaaacctatctgaacatttatcagcagttaagacgaaagaaacgc
ttccataaagaatccttcgatgatttcgatgcggagaaggccatgttggctgagtatgtc
gtacgtgatcggttcaagccgcttcgcgagcgcgtcaagcggctgaactttattaatctg
aaggctgtgtaccgtcagctgtttgccgatccggcgtttgccgcggcctatctggaggat
gaggatacgctgcccgcaagctgggatgccatctgtgcccgtacgttggaaaggttagac
gatggcgcaatggcctatgaggacgccactccgtttctgtatgccgtcgagcgcatccgc
ggattccagacgaatgtgtcggtgcgtcatatccttattgatgaagcgcaggattatacg
gcttttcaatttgcatatctgaaacgactgttcccgcgggccaaagtgactgcgcttggc
gatatgaatcaatccatcaatgcgcacgcttctctcggcgggagcggattctcagccatt
gaagcactgttcgatccggaggagacggagaaagtgacgctgatgcgcagctatcgttca
acgcgtccgatcgtcgaatttacatctcttctgattcctggcggagaggcgatcgagccg
tttaaccggagcggcgataagccgacgctcacagccgttcataatatcacggagctgaac
agccgcattgcagcacggattgaagcgctccaagcggaaggctatcgaacgattgccgtg
atctgcaagacagcggccgaaagccgaacggcatatgaagcacttcaggagaacatcgat
attcggctgatggagagagagacgaccgatttcgaacagggcgttgtcgtcattccttct
tacttggccaaaggcgtggagttcgacgccgtgatcgtatatgacgcttctgctcgctgt
tacggtagagaaagcgagcgaaagctgttctataccgtttgcacgcgcgctatgcatgag
cttcatctgtatggggttggggagtggagcccgtttatgacggacgaagccaagcagtgc
tgcacgctggaagaagagtaa
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integrated database retrieval system
