Paenibacillus spongiae: L1F29_18265
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Entry
L1F29_18265 CDS
T09530
Name
(GenBank) S-layer homology domain-containing protein
Organism
pspn
Paenibacillus spongiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Big_9
Cadherin_4
Cadherin_5
Big_13
AIM24
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
UVI27416
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Position
4019233..4023339
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AA seq
1368 aa
AA seq
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MKNRKGIFSLLAAVTLLLPLIGALAVTIAAPVSAAAHAGQIMTNYETETNNVYPGRATQY
TYSLGGVVLQSATLPAAADWVTPSNYYDTGWFRDSWNETYTYSNFGQISQTNDPMSIPPT
AAWATISSFQIEGTMTVPIRDTVYHYSVNGTDVLTAVNALLIPPNALWASLASFNDGWTP
SKNHTYATYTLQRATPSVQSFTISSNSGHPVYAKNGDEVTVALRTDVPIAVPVLKIGGVE
VPVSGSGTNWSASLELTGIVDEGTLPVYATVYTEEGTPGPILSATTDGSFVIYDNTSPVG
ALSINGGAAAANSANVILDVTTDGTTAQMRFSNDGTVWSGWETVALSKPWTMSVGDGVKT
VYLQLRDEAGNVSNMSDSITLDTVPPDAALTINSGAAYATSTDVGLAIGNPDGTAATMQF
SNDGLTWSGWEPYHATKAWTLAAGDGTKTVYLQLRDAAGNVAAASDGITLDTTAPSGTLV
IDNGALYATSTSVTLTVTSDDSAAEMRFSNDGTSWSRWESNSATKGWTLAAGDGVKMVRL
QLRDAAGNISDANDSITLDTTAPSGTLEIDNGALYAKTDNVTLSIGSDDTGAELRFSNDA
TLWSGWEPYTATKTWTLASGDGTKTVYLQLRDTAGHISAYSSGILLDTTRPVGSIVLNGG
ELLTTDPAVVIALTADDGAAPASGVVEASISIDGGATWSAWSHAASQLSVTLSGYGNITV
LVKVRDAAGNESLPLSDDITLRSIPTVLDGTLNGFEDTPYTFTASDFGYTNDDGSVLDRI
VIGTLPGNGRLELNGAAVLAGQSIRLADAGGLAFRPDADWNGITTLSWSAEAAGVASSGS
ATATIVVAAVNDPPTAEDLSFNTTANNEVNGQLKATDKENAALIYSIVDQPATGKLTLLD
SAAGTFSYIPANIGTVTFTYRVSDGTDNSAPATVTIINKQSEQPGQPWQPWLPEQPAGND
NLAAVVGAEKLDHLLQLTQEKTELGNTVTVELKGEQWEHSLGQHDGGKLVIRIRSGPDAG
VMQLDASMAKLLAERSLALALELDGRSVTVPAATIVSAAAAVSDPSAVIRIELAAVQQAK
ADELKGAAERIGAKVTAPSIHVQIYILSNGKHVSQSGINSYVDITYQPEEMAGKHSSTAV
LLLPSGELRPLPTLFRTTEGTVVLRIRGLTQGTLALINANVGFKDTDGHWAADAIKRLAD
RFVVSGVGGGYYEPNRTATRAEFSAILVQALALYDKDSQGARFSDVTEGSWYAEMLGAAN
QYDLITGYADGTFRPNATITREEAMVILARADSLVGLSTTLTETQVQEALSGYSDAAVVR
GWSREAVAQCITQGFMNGIGGELKPGDSVTRAQLALMVEKLLQKAGYI
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagaaaaggcatcttctctttgctggcggccgttacgctattgctgccgctg
attggagcgttggcagtcacaattgctgctccggtaagtgccgcagctcacgcagggcaa
atcatgaccaactacgaaacggagaccaacaacgtctaccccggcagggccacccagtat
acgtacagtctgggcggcgtcgtactgcaaagtgctactctgccggcggcggccgattgg
gtcacgccttccaattattatgataccggctggtttcgcgatagctggaacgaaacgtat
acgtacagcaatttcggccaaatcagtcaaacaaacgacccgatgagcattccgccaacc
gctgcctgggcaacgatatcttcttttcaaatcgaaggcactatgactgtcccgattcgt
gatacggtctatcattattccgttaacggaaccgatgttctgaccgctgtgaatgctttg
cttattccgccaaatgctctgtgggcgtcgctagcctcctttaatgatggctggacccca
agcaaaaatcatacgtatgcgacgtatacgctgcaacgggcgactccatccgtccaatcg
ttcacgatttcttccaatagcggacatcccgtctatgcgaagaacggcgatgaggttacg
gttgcgctgcggaccgatgttccgattgctgtacctgttctgaaaattggcggtgtagag
gtgccggtatcgggaagcggcaccaattggagcgctagcctggagctaacgggcatcgtc
gacgaaggaacgctgccggtgtatgccaccgtgtatacggaggaaggcacacctggcccg
attctctccgcaacgacagacggctcattcgtcatctacgacaatacgagcccggtcggt
gcgctgtccattaatgggggagcggctgccgctaattccgccaacgttattttggacgtc
acgacggacggaacgactgcccagatgcggttctccaatgacgggacggtttggagcggg
tgggagacggttgcgttgtctaaaccatggacgatgtcggtcggcgacggtgtgaagacg
gtgtatttgcagcttcgtgatgaagccggcaatgtttcgaatatgtcggacagcattacg
ctggacacggttccgcctgacgccgcgctgacgattaatagcggcgccgcctacgctact
tcaacggatgtcgggctagctatcggcaaccctgacggaacggccgctacgatgcaattc
tcgaacgacggattgacctggagcgggtgggagccatatcatgcaacgaaagcatggacg
ctggcagccggcgacggaacgaagacggtatatctgcaattgcgtgacgcggcgggcaac
gtagcggctgcaagcgatggcatcacgttggatacgactgcgccaagcgggacgctggtg
atcgacaatggcgctctatacgcgacatccacgagtgtaacattgacggtcacctccgac
gattcggctgctgagatgcgattctcgaacgacgggacgagttggagcaggtgggagtct
aatagcgcgaccaaagggtggacgttggcagccggcgacggtgtgaaaatggtgcgcttg
caactgcgtgacgcagccggcaacatatcagacgcgaatgacagcatcacgttggatacg
acggcgccaagcgggacgctggagatcgacaatggcgcgttgtacgcgaagacggacaac
gtaacactaagtattggctcggatgacactggcgccgaattgcgtttctcgaacgacgcc
acgttatggagcggctgggagccatacactgcaacaaagacatggacgctcgcttctggc
gacggcacaaagacggtatatctgcagctacgagatacggcaggtcatatttccgcctat
agttctggtattctgcttgatacgacccgcccggtgggatccatcgtcttgaatggcggc
gaacttttgacaacggatccagcggtagtaatcgccttaacggctgacgatggagccgcg
cctgcatccggagttgtggaggcgagtatttcgatcgacggcggcgcgacttggagcgct
tggtctcatgccgcttcccagctttcggttacgttgtccggttacggcaacataacggta
ttagtcaaggttcgggatgccgccggcaatgaaagcctccctttgtcggacgatattacg
ctgcgttcgattccaaccgtgctggacggcacactgaatggattcgaagacacgccttat
acgttcactgcatccgacttcggttacaccaacgatgacggctctgtactcgaccgcatt
gtgatcgggacgctgccggggaacggccggctcgagcttaatggtgctgccgtgctcgca
ggacagagcattcgtttggctgatgccggggggctggcgttccggcctgacgctgattgg
aacggaataacgacgctcagctggtcagcggaagcggcgggcgtggcatcttccggcagc
gcaacggcgacgattgtcgtcgctgcggtgaacgatcctccgactgcggaagatttaagc
tttaacacgacagcgaataacgaagtgaacggccagttgaaggcgactgacaaagagaac
gctgcactcatctatagcattgtggatcaaccagcgacgggcaagctgacgctgctcgat
tcggccgctggtacattctcctatataccggcgaacatcggcacggtgacgtttacgtat
cgggttagcgacggtacggataactccgctcccgcaaccgtcacaatcatcaacaaacag
tcggaacaaccagggcagccatggcagccttggctgccggagcagcctgccggtaatgac
aatctggcggctgtcgtcggcgccgagaagctggatcatctgctgcagctgacgcaggag
aagacggagctaggcaatacggtgacggtagagctgaagggtgaacaatgggagcattcg
ctcggtcaacacgatggcggtaagttggtcatccgcatccggtcaggtccggatgcaggc
gtcatgcagcttgacgcttcaatggccaagctgcttgccgagcggagtcttgcattagcg
ctggagttggacggccgatcggttaccgtccctgcagcaacgatcgtctcagcggccgcc
gcggtttccgacccatcggccgttatccgcatcgagttggcggcagtgcagcaggcgaaa
gctgatgagctgaagggagcggcggaacggatcggggcgaaggtgacggcaccgtcaata
cacgttcagatatatatattgtcgaacggaaaacatgtgagccagtcaggtattaatagc
tatgtagacataacctatcaaccggaggaaatggccggcaagcattcctcgacggctgtg
ctattgctgccaagcggtgaactgaggccgcttccgactttattccggacgaccgagggt
actgtagtgcttcgtatccgcggattgacgcaaggcacattggcattaatcaatgccaat
gtgggctttaaggacactgacggccattgggcagccgatgcaattaagcggcttgctgac
cggttcgttgtgagcggggtcggcggcgggtattacgagccgaaccgcacggcgacgaga
gctgagttttccgccatactcgtacaagcgctcgctttgtatgacaaggacagtcaaggg
gcaagattctctgatgtgacagagggctcctggtatgccgagatgcttggcgcagctaat
caatacgatcttattaccggatatgccgacggtacgtttcgtccgaatgcgacgattact
cgtgaagaggctatggttattctagccagagccgactcgcttgtgggtttgagtacgaca
ctgacggaaacgcaggttcaggaagcattgagcggctatagcgacgcggcggttgttcgc
ggctggtcgcgggaggcggttgcacagtgtattacacagggcttcatgaacggcattggc
ggcgagttaaagccaggtgattcggtcacacgtgcacagcttgcgctaatggtcgagaaa
ctgctgcaaaaggcgggatatatttaa
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