Paenibacillus spongiae: L1F29_19875
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Entry
L1F29_19875 CDS
T09530
Symbol
tnpB
Name
(GenBank) IS200/IS605 family element RNA-guided endonuclease TnpB
KO
K07496
putative transposase
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
L1F29_19875 (tnpB)
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Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_ISL3
zf_DPOE_2
Motif
Other DBs
NCBI-ProteinID:
UVI33691
UniProt:
A0ABY5SIB7
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Position
complement(4400793..4401896)
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AA seq
367 aa
AA seq
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MHKAFRFRLYPTMEQKLLINKTLGCCRFVFNHFLAARRQTYRIEQKLLGYTACSKQLPSL
KQDHEWLAEVDATALQSALKALDEAFQGFFGKRNDYPCFKKKHGREQSYTSKNNNDSIRA
EGSRIRLPKLGFVCFAQSREIVGRILSATVRRTPSGKYFVAVCCQMLAYPYVPVPQDPAV
GVDLGLKHFATLSGGDKIDIPRFLSRHEAKLAKWQRRMSRRAKGGKNREKARLKVARLHE
RITNGRLDFLHKASTRLIRENQTICLEDLSVQNMQQNHKLAKSIADVSWSLFRKLLAYKA
NWYGRTIVIIGKTFPSSQLYSVCEYRNQEVKQLQLREWRCPACGSHHDRDHNAAVNIRKE
GLRLLAM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atacacaaggctttccgctttcgtctctatccgacaatggagcagaaattacttatcaat
aaaacgctgggctgctgccggttcgtcttcaatcatttccttgccgcgcgcaggcaaacc
tatcgtatcgaacaaaaactcctggggtataccgcttgctccaaacagcttccttcattg
aaacaagatcacgaatggttagcggaagtcgatgcaacagcgcttcaaagtgccctgaaa
gcattggatgaggcgtttcaaggattctttggaaaacgaaacgattatccttgcttcaaa
aaaaagcatgggcgggaacagagctacacctccaaaaacaataacgattccattagggca
gaaggcagccgcattcgcttacccaagcttggcttcgtttgttttgcccaaagtcgtgaa
atcgtgggacggatcttatcggctaccgttagacgcacgccgagcggaaaatacttcgtt
gccgtctgttgccagatgctcgcttatccttacgtaccggtaccgcaagacccagcagtt
ggtgttgatcttggcttgaagcatttcgcgaccttgtcgggtggcgacaaaatcgacatt
cccagattcttgagccgccacgaagccaaactggccaaatggcagcggagaatgtcacgc
cgtgccaaaggcggaaaaaaccgcgagaaagcccgcctgaaagtggcgcgtctgcatgaa
cgcattacgaacggtaggctcgactttctgcacaaggcgtcaacccggttgatccgtgaa
aaccaaacgatctgcctggaagacttgtccgtgcaaaacatgcaacaaaatcacaaactg
gccaagagcatcgccgatgtatcctggtccttgttccgtaaactattggcatacaaagcg
aactggtatgggcgaacgatcgtcatcatcgggaaaacatttccctccagccagctatac
tcggtatgtgaataccgcaaccaggaagtcaagcaattgcagttgcgggagtggagatgt
ccggcatgcgggagccatcatgatcgcgaccataatgcagccgtaaacataaggaaagaa
ggcttgcgtttgcttgccatgtaa
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