Paenibacillus spongiae: L1F29_20520
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Entry
L1F29_20520 CDS
T09530
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L1F29_20520 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspn03400
]
L1F29_20520 (priA)
Enzymes [BR:
pspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F29_20520 (priA)
DNA repair and recombination proteins [BR:
pspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L1F29_20520 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
PIF1
Cas3-like_C_2
AAA_19
Zot
MarR_2
AAA_30
Zn_ribbon_6
Sigma70_r4
Flavi_DEAD
SLFN-g3_helicase
ADDB_N
TIR
Motif
Other DBs
NCBI-ProteinID:
UVI27837
LinkDB
All DBs
Position
complement(4549372..4551870)
Genome browser
AA seq
832 aa
AA seq
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MIAKVIVDVPSRQTDRPFDYEVPKDMQGWLEVGSRVGVPFGGRVVQGFVVAVAETAAVDS
KKLKAVAELLDHTPPLSPDLIQLAEWISDKYCCPLTIALQAMIPAALKGKAETTVTLADD
SRTVFIESSEWAEYMRRSGGSVKLSALQEKFPLSANEVKAAIREGALLERVAIRDRLSVK
KMLTVFPPGDRNEALEALAGLPARAAKQREVLRYMIDHEQPITMQELVDLLQTTSGTVRA
LAEKGFVVIREVEMDRDPYAGREFQRTAPLPLTDEQKAVFAPIAEAIDNRDSRVFLLHGV
TGSGKTEVYLQTIEHCLQLHKQAIVLVPEIALTPQMVERFKGRFGDAVAVLHSRLSNGER
YDEWRKIRERRARVAVGARSAIFAPFDRLGLIIIDEEHESSYKQEESPKYHARDVAVQRA
RQHGAAVVLGSATPSLESYAAASRGGQAAELAGRGSALLPMPVRVGGRPMPPVHLVDMRE
ELKNGNRSMFSRQLHQSLASRLERGEQSVLLLNRRGYSTFVMCRSCGYTAQCPHCDISLT
YHQKARTLRCHYCGHAEITPTVCPSCESEHIRFFGTGTQRVEEELSKLFPGIRVIRMDVD
TTTEKGSHEKWLTMFGERQADVLLGTQMVAKGLDFPYVTLVGVIAADTSLHLPDFRAAEK
TFQLLTQVAGRAGRHELPGEVVIQSYNPEHYAIQTAQQHHYAAFIQEELRHRRYMSYPPY
CRLILVTLSHEQLPLVIAEGEKLAGLLRQAVSEAGLSASSEEGTTSRFMDILGPVASPIP
RMKDRYRFQCMIKYRGNVDAVGMLKRSVRSLAGSNGQHQVQIGIDVDPQVIL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccaaagttatcgtcgatgtgccgagccgccaaaccgaccgtcccttcgattac
gaggtgccgaaagacatgcaaggctggctggaagtcggcagcagagtcggagttcccttt
ggcggacgggttgtgcaaggcttcgtcgtcgcagtcgcggagactgcggcggtggacagc
aagaagctgaaggccgttgcagagctgctcgaccatacgccgccgttatcgccggatctg
attcagctggcggaatggatcagcgacaaatattgctgcccgctcacgattgcgctgcaa
gccatgatccctgcggctttgaaagggaaagcggaaacgacggtcacgctcgccgatgat
agccggacggtgtttattgaatcctcggaatgggcggaatatatgcgccgcagcggcggt
tccgtaaagctgtcggcgctgcaggagaaattccccttatccgcgaatgaggtgaaggct
gctatccgggaaggcgcattattggaacgcgttgccatccgggaccggttatcggtcaag
aagatgctcacggtcttcccgccgggcgaccggaacgaagcattggaggcattggccggt
ctcccggcaagagcggctaagcagcgggaagtgctccgatacatgattgatcatgagcag
ccgattacgatgcaggagctcgtggatttgctccagacgacatcgggaacggtcagagcg
ctggccgagaagggattcgtcgtgatccgggaagtcgagatggaccgggacccttacgcc
ggacgtgaatttcagcgaaccgctcctcttcccttaacggatgaacagaaagccgttttc
gctccaattgcggaggctatcgacaatcgggattcccgggtgttcctgctgcatggggtg
acggggagcgggaagacggaagtgtatttgcaaacgatcgagcattgcctgcagcttcat
aaacaggcaatcgtgctcgttcccgagattgcattgacaccgcagatggtcgaaaggttc
aaagggcgcttcggcgatgccgtagccgttcttcatagccgtctatcgaacggggagcgc
tacgatgagtggcggaaaatacgcgaacgccgggcccgtgtggccgtaggcgctcgatct
gcgatatttgctcctttcgaccggctgggactcattattatcgacgaagagcatgaatcc
tcctacaaacaggaggaaagcccgaaataccatgcaagagacgttgccgtccagcgggcc
aggcagcatggcgccgcagttgtgctcggatcggcgacgccttcgctcgagagctatgct
gccgcatcgcgaggcggccaagctgccgagctggcaggcagagggtcggcgctgctgccg
atgccggttcgggtaggagggaggccgatgcctcccgtgcatctcgtcgatatgcgcgag
gagctgaagaacgggaaccgttccatgttcagcaggcagctgcaccagtcgcttgcatcc
cgcttggaacgcggcgaacagtcggtgctgctgctcaaccgaagaggctattctacgttt
gtcatgtgccgctcttgcggctataccgcgcagtgtccgcattgtgatatatcccttact
taccatcagaaagcacgtacgctccgctgtcattactgcggccatgccgaaataacgcca
acagtctgcccgtcctgcgaaagcgagcatatccggttcttcggaacaggaacgcagcga
gtggaagaagaactgtccaagctgtttcccggcatccgtgtcattcgcatggatgtggac
accacgacggagaagggctcgcatgagaaatggctgacgatgttcggcgagcgtcaagcc
gatgtgctgcttgggacacagatggtagccaaaggactcgatttcccatatgttacttta
gttggcgttatcgctgcggatacctcgctgcatttgcccgatttcagagcggcggaaaaa
acgttccagctcctgacccaggttgcgggccgtgcaggccgtcacgagctgccgggcgaa
gtggtcattcaatcctataacccggagcattacgccatccagacggctcagcagcatcat
tatgctgcctttatccaggaagagctgcggcatagaagatacatgtcgtatccgccatat
tgccggctaattctcgtaaccttgtcgcatgagcagctcccgctggtcatcgcagaaggc
gagaagctggccggattgcttcgccaggcggtttcggaggcgggtttatcagcctcttcc
gaggaaggaacgacaagccgcttcatggatattctcggccctgtcgcttcgccgataccg
agaatgaaagatcgctatcgttttcaatgtatgataaaatatcgtggaaatgttgacgcg
gtgggcatgctgaagcggtctgtccgctcgcttgcgggttctaacggccagcatcaggtt
cagatcggcatcgatgttgatccacaggtcattctataa
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