KEGG   Paenibacillus spongiae: L1F29_21695
Entry
L1F29_21695       CDS       T09530                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pspn  Paenibacillus spongiae
Pathway
pspn03030  DNA replication
pspn03430  Mismatch repair
pspn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pspn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L1F29_21695
   03430 Mismatch repair
    L1F29_21695
   03440 Homologous recombination
    L1F29_21695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pspn03032]
    L1F29_21695
   03400 DNA repair and recombination proteins [BR:pspn03400]
    L1F29_21695
Enzymes [BR:pspn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L1F29_21695
DNA replication proteins [BR:pspn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L1F29_21695
DNA repair and recombination proteins [BR:pspn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L1F29_21695
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C SpoVR
Other DBs
NCBI-ProteinID: UVI28056
UniProt: A0ABY5S2F8
LinkDB
Position
complement(4798973..4799710)
AA seq 245 aa
MKQQRGVGRMWHLYKMGGITPAVASMLGAQNAQQMAFIRSMSKEQRKQPVMDQPLREMEV
VVFDLETTGFYPLNGDEILSVGAVVLKGEELQESRSFYSLVNPKRRVPKHITDLTGITNE
MAENGSELMQVLHDFMEFIDRRMLIAHASGHDKQFLNAALWRTSKINLTHRVLDTMMVAK
WLDPNRDNGYGLDELLTGAGIEITKRHHALEDSIMTAKLWLHYLKKIMERNIVTLGDLYA
YLSKH
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaagcagcaaagaggcgtcggtcggatgtggcatctatacaagatgggcggtataacg
ccggctgttgcatcgatgctaggagcgcagaacgctcagcagatggcgtttatccggtcc
atgtcgaaggaacagcgcaagcaacccgtcatggatcaaccgctgcgcgagatggaggtc
gtcgtgttcgatctggagacgacaggcttctatccgctgaatggcgatgaaattctgtcg
gtaggcgcggttgtgttgaagggggaagagcttcaagaaagccgcagcttctatagtctt
gtaaatccgaaacggcgcgtgcccaagcatattaccgacttgaccggaattacgaatgaa
atggcggagaatggatcggagctgatgcaggtgctccatgacttcatggaatttatcgac
aggcgtatgctgatcgcacacgccagcggccatgacaagcagtttcttaacgctgcgcta
tggcgcacatcgaagatcaacttgactcatcgtgtcctcgatacgatgatggtcgccaag
tggctggatcccaatcgtgataatggatatggcttggacgagctgctgacgggtgccggc
atcgagattacgaagcgccatcatgcgctggaggactcaatcatgacggcgaagctctgg
ctgcattatttgaagaagataatggagcgtaacattgtgaccctgggcgatctatacgct
tacctgagcaaacattag

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