Paenibacillus spongiae: L1F29_21810
Help
Entry
L1F29_21810 CDS
T09530
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L1F29_21810 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspn01007
]
L1F29_21810 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspn03016
]
L1F29_21810 (aspS)
03029 Mitochondrial biogenesis [BR:
pspn03029
]
L1F29_21810 (aspS)
Enzymes [BR:
pspn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
L1F29_21810 (aspS)
Amino acid related enzymes [BR:
pspn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
L1F29_21810 (aspS)
Transfer RNA biogenesis [BR:
pspn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
L1F29_21810 (aspS)
Prokaryotic type
Other AARSs
L1F29_21810 (aspS)
Mitochondrial biogenesis [BR:
pspn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
L1F29_21810 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UVI28078
LinkDB
All DBs
Position
complement(4822967..4824778)
Genome browser
AA seq
603 aa
AA seq
DB search
MMLKTHACGQLTKKDVGQTVILNGWVQRRRDLGGVLFIDLRDRTGIVQIVFNPDFSGDAL
AIADRARNEFVLAVRGQVVERDADTVNANIATGEIEVRITEIEIMNGAKTPPFPIEDGVE
VDESIRLKYRYLDLRRPEMQKTLLLRSKAAKVFRDYLDEQGFIDVETPILTKSTPEGARD
YLVPSRVHPGEFFALPQSPQIFKQLLMVSGLERYYQIARCFRDEDLRSDRQPEFTQVDIE
TSFLSQDQLLELMEGLVVKLFRETVGVEIETPLQRITYADAMNKYGSDKPDLRFGLEMED
ITDIVSGSDVKVFASVAAGGGVVKALNAKGCANWSRKELDDLQPFAARYGGKGLAWVTVK
EGEWRGPIVKFFKPEEIEALTARLGVEEGDLLLFSADKKKVVADVLGNLRLMIGKQLGLI
DESKFKFAWVVDFPLLGWDEDAKRYVAEHHPFTRPNEDDLHFFETDPGQIRAQAYDLVLN
GYEVGGGSMRIFKRDVQEQMFKALGFSTEEAYEKFGFLLDAFDYGTPPHGGIAFGFDRLV
MLLAGRTNLRETIAFPKTASATDLLCDAPSEVDLSQLQQLHIRTLQKPAKQAEAAAAAGN
AQN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaaaacgcatgcttgcggtcaattaaccaagaaggatgtcggccaaaccgta
atactgaacggttgggttcaacgccgccgcgatctgggcggagttttgtttatcgatttg
cgcgaccgtaccggtatcgtccaaatcgtctttaaccctgatttctcgggagacgctttg
gcaatcgcggatcgcgctcgtaacgaattcgttctggctgtccgcggacaagtggtggaa
cgcgatgcagatacggtgaacgccaacatcgcgacaggcgaaatcgaagtccgcattacg
gagatcgaaattatgaatggcgcgaagacgcctccgttcccgattgaagatggcgtcgag
gtcgacgagtccattcgtctgaagtaccgttatctcgaccttcgccgtccggaaatgcag
aagacgctgctgcttcgttcgaaagcggctaaagtattccgcgattatctcgacgagcaa
ggattcatcgacgtcgaaacgccgattctgaccaagagcacgccggagggagcacgcgat
tatttggtgccaagccgcgttcatccgggcgagttcttcgcattgccgcaatcgccgcag
attttcaagcagcttctcatggtcagcggattggagcgttattatcaaattgcacgctgc
ttccgcgacgaggatcttcgttccgaccgtcagccggaatttacgcaggtggacatcgag
acatcgttcctctcccaggatcagcttctcgagctgatggaagggcttgtcgtcaagctg
ttccgtgaaacggtcggcgtggagattgaaacgccgctgcagcgtattacgtacgcggac
gcgatgaacaaatacggctcagacaagccggatcttcgctttggcttggagatggaggac
attaccgatatcgtctccggcagcgatgtgaaggtattcgcttcggttgcggcaggcggc
ggcgtcgtgaaggcgctcaatgccaagggctgcgcgaattggagccgcaaggagcttgat
gatctgcagccattcgcagctcgatatggcggcaaaggattggcatgggtaacggtgaag
gaaggcgaatggcgcggaccgatcgtgaaattcttcaagccggaagaaatcgaagccttg
acggcgcgtcttggcgttgaggaaggcgacctgctgctgttctccgccgacaagaagaaa
gtcgtcgccgatgtgctgggcaacctgcgcctgatgatcggcaagcagctcggcctgatt
gacgagtcgaaattcaagtttgcttgggttgtcgattttcctctgcttggttgggatgaa
gatgcgaagcgttatgttgcggagcaccacccgttcacccgtccgaacgaagacgatctc
catttcttcgagacggatccgggtcaaatccgcgcacaggcttacgaccttgttctgaac
ggttacgaggttggcggcggttcgatgcgtattttcaagcgcgatgttcaagagcaaatg
ttcaaagcgcttggcttctcgacagaagaagcttatgagaaattcggcttcctgctcgac
gcattcgattacggcactcctccgcatggcggcatcgcattcggcttcgaccgcttggtc
atgctgcttgccggccgcacgaacctgcgcgagacgatcgcattcccgaaaacggcgagc
gcgaccgatctgctctgcgacgcgccttccgaggtggatttgtcccagcttcagcagctt
cacatccgcacgctgcagaagcctgctaaacaggcagaagcagcggctgcggcaggtaat
gcgcaaaactaa
DBGET
integrated database retrieval system
