Paenibacillus spongiae: L1F29_24310
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Entry
L1F29_24310 CDS
T09530
Name
(GenBank) CBS domain-containing protein
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
pspn
Paenibacillus spongiae
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspn03000
]
L1F29_24310
Transcription factors [BR:
pspn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
L1F29_24310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
Sigma70_r4
HTH_PafC
HTH_24
HrcA_DNA-bdg
HTH_Mga
GntR
Sigma70_r4_2
MarR
HTH_AsnC-type
PH0730-like_N
HTH_Crp_2
HTH_23
Put_DNA-bind_N
Xre-like-HTH
MarR_2
HTH_9
HTH_IclR
HTH_28
Phage_rep_O
HTH_17
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
UVI28548
LinkDB
All DBs
Position
complement(5381412..5382062)
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AA seq
216 aa
AA seq
DB search
MTTIGMEWIDIELTARQLDIVKLVKAHAPITGDQIAEMLGLSRATIRSDLSLLVMLHMLS
AKPKVGYFPGELHKAEASAPNWMSISVKQVQGMPVIVTGSLSVHEAVVTLFLENAETLTV
IDDQKRFLGIVTAKDMLKLTLGNSQAGSMPVGMVMSRLPDMAAVGPEDLVETVVRIMLAH
GLDGVPVLSPEREVVGWVGKTTILRRLLEAADEIHE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacgattggaatggagtggatcgacatcgaactgaccgcgcgtcaacttgacatc
gtaaaacttgtcaaagcgcatgcgccaataacgggggaccagattgccgagatgctcggc
ctgagtcgggcgacaatccgatcggacttgtcgctcttggtcatgctgcatatgttaagc
gccaaaccgaaggtcggctattttcccggtgaattgcataaggcagaagcttctgctccc
aattggatgagcatatccgttaagcaggtgcagggaatgcctgtcatcgtgacggggtct
ctctccgtgcatgaggcggttgtgacgttgtttcttgagaatgcggagacgctgacggtc
attgacgatcagaaacgtttcttaggtatcgtcaccgccaaggacatgctgaagctgacg
ctgggcaattcgcaggcgggctcgatgccggttggaatggttatgtcgcgcctgccggac
atggctgcggtaggtccggaagacctcgtagagacggtcgtacgtattatgctagcgcat
ggtcttgacggcgtgcccgtgctgtcgccggaacgtgaagtcgtcggttgggttggaaag
acgacgattctacggcggttattggaagcggcggacgagattcatgaatag
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