Paenibacillus spongiae: L1F29_26745
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Entry
L1F29_26745 CDS
T09530
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00450
Selenocompound metabolism
pspn00970
Aminoacyl-tRNA biosynthesis
pspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
L1F29_26745
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L1F29_26745
Enzymes [BR:
pspn01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
L1F29_26745
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Gene cluster
GFIT
Motif
Pfam:
SelA
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
ATG1-like_MIT1
RtxA_C
Motif
Other DBs
NCBI-ProteinID:
UVI29009
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Position
complement(5949271..5950383)
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AA seq
370 aa
AA seq
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MDHSLHAKYGLKRVVNASGRMSILGVSAPTDSVMEAMKQGGQQYVEMAELVRRSGEYVAD
ILGAEGAVVVNSASSGIALSVAAVVTEGNPRVSLRLHQEHVLKNEIIMLKGHNVQYGAPV
ETMVYLGGGSIVEVGYANEGRKEHIEEAISDRTAAILYVKSHHCVQKNMISAEEAWEVAQ
RRGVPLIIDAAAEEDIRKYVKCSDLAIYSGSKAIEGPTSGIVGGKRKYIDWLNVQLHGIG
RSMKVGKETIFGLLQALDEYMSKADKSQQEKAALEPLLALSALTGVKVSIVQDEAGRAIY
RGRIHIDAAAAGIGAQAVNDQLREGDIAVYTRDYGVRQGYFDIDPRSLQGDDLQVIAGRI
QEIVGGANHV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcattgcatgctaaatacgggctcaaacgggtcgtcaatgcaagcggacgg
atgagcattctgggcgtatccgcgccaacggacagtgtcatggaagcgatgaagcaaggc
ggacagcagtatgtggagatggcggagcttgtacggcgttccggcgaatacgtcgcggac
attctgggtgcggaaggagcggtcgtcgtcaactctgcgtccagcgggatcgcgctttcc
gttgctgccgtcgtgacggagggcaatccccgtgtcagcttgcggctgcaccaggagcac
gtgctcaagaacgagatcattatgctcaaggggcataatgtgcaatatggcgcgcccgtc
gaaacaatggtttacctcggaggaggctccatcgtcgaagttggctatgccaacgagggg
cgcaaagagcatatcgaggaagcgatctccgatcgaaccgccgctattctatacgtcaag
tcccaccattgcgtgcagaaaaacatgattagcgccgaggaagcctgggaagtcgcccag
cgccgcggagtgccgctaatcatagatgctgcggcggaggaagatatccgcaagtatgtg
aagtgctcggatctggcgatatacagcgggtccaaagcgattgaaggccctacctcaggc
attgtcggcggcaaacgcaaatatatcgactggctgaacgttcagctgcacggcatcggg
cgcagcatgaaggtcggcaaggagacgatattcggactgctgcaggcgctggacgaatat
atgagcaaagcagataagagccagcaggagaaggccgcgctagagccattgcttgccttg
tccgccctgacgggagtaaaggtcagcatcgtgcaggacgaagcgggccgtgccatttat
cggggaagaatccacattgacgcggctgcggcgggcatcggggcgcaagcggtgaacgat
cagcttcgcgaaggtgatattgccgtctatacgcgcgattacggcgttcgtcaagggtat
ttcgatattgatccgcgctcgctgcaaggagatgacctgcaggtcatcgcgggcagaatc
caagagatcgtaggaggggcaaaccatgtctag
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