Paenibacillus spongiae: L1F29_27280
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Entry
L1F29_27280 CDS
T09530
Name
(GenBank) S-layer homology domain-containing protein
Organism
pspn
Paenibacillus spongiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
CHB_HEX_C_1
Fn3_assoc
Glyco_hydro_42
Glyco_hydro_14
Motif
Other DBs
NCBI-ProteinID:
UVI29102
LinkDB
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Position
6081403..6084675
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AA seq
1090 aa
AA seq
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MRKFSIAAAAMIALASLQCTGISATTAEFKDVPDTSPYFAYIHDLKTLGITDGIAEGVYG
PKQTLTRAQFAKFVTVAFQLKDQGGPAPFPDIRDHWGAAYIRAAYQAGIVNGTSDTTFSP
NEPVKRQEASVMVWRFAKKQGLAPGGALNFSDKPDTWAAEGISGIIAHGWYGSDVTQDSG
EWSYRPQDAMTREEAAALIDLSIKEVPGSLSAAAAPVPMAPAPAAPVPMAPAPAAPVPMA
PAPAAPVPMAPAPAAPPATGEAIPTPVKPPAVPAGDVTSGLPSGSVPYGSMAILSAAKPG
ATIYYTTDGSDPRTSSTRKPYTSPIPVLGGLQLKTCAVYHPSSGKTEVSGVSVYEYKVGS
VSPPGPSVGLYDPLESFKLMTSRANMYIATDHPAYFGSDAKRMVRTSTAPGSIVYHTKND
IASVLFYSYFFTGIELEKSKVFASADGKTYQEIPVKTYPIGSPSGDWQQYAYEASSLPAG
MRYLKIEQHGAAKSWSPQLSRVSINRITTSVDVKSTRNAESLQVELSSATQGARIYYRKD
NAPAFQLYTGTFRLTGYSVLETYAVKDGLEPSPIRKTKLNGSSDILVDRFGQIVTAGFPE
KVMSEQELEADAQADASYYDSLKPLADLDRYGGLAGSAAKYGLKGTGYFAIQQLDGRKVM
KTPSGNIFFSLGMNGITPHETYTMVKGREQQFESLPPYEGTYAPAFISPDHSSFSFYIAN
KYRKTGAFPTESSFYTEAVGRLKKWGFNSAGGYSPEKFGNKNQFPYTRMLPLDIDSAKLD
GISIFDIFAPDAAAKIDEAFAKALPPNKNDPMLIGYFIGNEYDFHKFYSNVPKLKASSAA
IKGRLVKMVKDKYQTIDMFNRNWGTSFTSFNDLLEAELPVKTSQSWADMDAFFRYYLDTF
YGTVSRLYHKYDPNHLLLGDRWITTSFHNAKFRDVMAEVEGKYSDVISINYYSYKIEADL
LKEVYTKSGGRPILLSEFGYGTAEQGLQPLLPNAAVNQFQRGMRYRNYVEGAVSLGYVVG
AHWFNYVDQAPLGRYWQGIGEWAERYNSGVLNVTDRPYKSFLSGAMQTNYDIYKVLLGER
PKFYYDFSQK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattttcgattgcagccgccgcgatgatcgcccttgcttcattgcagtgcacg
ggaatcagcgcaacgacggcggaatttaaagacgtgccggatacaagcccctatttcgct
tatattcacgacttgaaaacgcttggcataacggacggaatcgccgaaggggtttacggt
ccgaaacagacactgactcgcgcccagtttgccaaattcgtcaccgtcgcttttcagctg
aaggaccaaggaggaccggcgcccttcccggatatccgggatcactggggagccgcctat
atacgcgccgcctatcaggcgggcatcgttaacggcacttccgatacgactttttcaccg
aatgagccggtcaaacgccaagaagcttcggttatggtatggcggtttgccaagaaacag
ggtctcgctccgggcggcgcgctgaatttcagcgataagccggatacctgggcggcggaa
ggaatcagcggcattattgctcacggctggtacggttcggacgttacccaggattccggc
gagtggtcgtaccgacctcaggacgcgatgacccgcgaggaagcagcagccttaatcgac
ctgtcgataaaagaggttcccggcagcctgtctgcggccgcggcgcccgtgccgatggcg
ccggcacctgcagcgcccgtgccgatggcgccagcacccgcagcgcccgtgccgatggcg
ccggcacccgcagcgcccgtgccgatggcgccggcacccgcggcgcccccggccactggg
gaggctatacctacaccggtcaagccgcccgcggttcccgcaggcgacgttacatcaggc
cttccttcgggaagcgttccttacggaagcatggcgatactgagcgccgccaaaccaggc
gcgaccatctactacacgacggatggcagtgatccccggacatcgtccacccgcaagccg
tatacttcgcccattccggtactaggagggcttcagttgaagacgtgcgcggtataccat
ccctcttccggcaaaacggaagtcagcggcgtttccgtttacgagtataaggtcgggtcc
gtatcgccgccggggccgtccgtaggcctgtacgatccgctcgaaagcttcaaactgatg
acgagccgcgcgaatatgtacatcgctacggaccatcccgcttacttcggcagcgatgcg
aaacggatggtgcgaacgtcgacggcgccgggaagcattgtttaccatacgaaaaacgat
atcgcttctgtgctcttttacagctacttttttaccggaattgagctggaaaagagcaag
gtgttcgcctcggcggacggaaaaacgtatcaggaaataccggtcaaaacctatccgatc
ggctctccttcaggcgattggcagcagtacgcctatgaagcttcttcgctaccggcaggg
atgcgctatttgaaaatcgagcagcacggagccgccaaatcctggtcgccgcagctttcc
agggtatcgatcaatcgaatcaccacttccgtcgacgtcaagtcgacccgaaacgccgaa
tcgcttcaggtcgagctgtcttcggcgacccaaggggcccgaatctattaccgcaaggac
aacgcccccgcgtttcagctctacaccgggacgttccggcttacagggtatagcgtgctc
gaaacctatgccgtgaaagacggcctggaaccgagtcccatccgcaaaaccaagctcaat
ggaagcagcgatattttggtcgacaggttcggtcagatagttaccgcgggttttccggag
aaggtgatgagcgagcaggagctcgaagcggatgcccaggctgatgcttcctattacgac
agcctgaagccgctggcggatctggaccgttacggcggtctggcgggcagcgcggccaaa
tacggcctgaaaggcaccggctacttcgcgattcagcagctcgacggccggaaggtgatg
aagacgccaagcggcaacattttcttcagcctgggcatgaacggaatcaccccccatgaa
acctatacgatggtcaagggccgagagcagcagtttgaatcgctccctccctatgaggga
acgtacgcgccggctttcatctcgcccgatcacagcagtttctcgttctatatagcaaat
aaatacaggaaaacgggagcgtttccgacggagagctccttctatacggaagcggtcggg
cggctgaagaaatggggctttaacagcgcggggggctattcgcccgagaaattcggcaat
aagaatcaattcccttacacgcgaatgcttccgctggacatagactcagcgaagctggac
gggatttcgatcttcgatattttcgcgcctgacgccgcggccaagattgatgaggcgttt
gcaaaagcgctgccgccgaacaagaacgacccgatgctgatcggctatttcatcggcaac
gaatacgattttcacaaattttattccaacgtgccgaagctgaaggccagctccgccgcc
attaaaggccgtctggtcaaaatggtgaaggataaataccagaccatcgatatgttcaac
cggaactggggcacaagctttacctcctttaacgatctgcttgaagcggagcttccggtg
aaaacgtcgcagtcctgggcggatatggatgcgtttttccggtattacctcgatacgttc
tatggaacggtttcgcggctgtaccataaatacgatccgaaccacctgctgctcggggat
cgctggatcacgacctccttccacaatgcgaagttccgcgacgtgatggcggaggtcgaa
ggaaaatattccgacgtgatcagcattaactattactcctataaaatcgaggccgatctg
ctgaaggaagtctatacgaaatcgggcggcagaccgattctgttaagcgaattcggctac
ggcaccgcggagcaggggctgcagcctcttctgcccaatgcggccgtgaaccagttccag
agaggcatgcgctaccgcaattacgtggagggcgccgtgagtctcggctatgtcgtgggt
gcccattggtttaattatgtggatcaagcccctctcggccgatattggcagggaatcggc
gaatgggcggaacgctataattcgggcgtcctcaacgtcacggaccgtccatataagtcc
ttcctgtccggcgccatgcagacgaactacgacatctacaaggtccttctcggggaacgg
ccgaagttctattacgatttcagccaaaaataa
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