Paenibacillus spongiae: L1F29_32010
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Entry
L1F29_32010 CDS
T09530
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pspn
Paenibacillus spongiae
Pathway
pspn00260
Glycine, serine and threonine metabolism
pspn00460
Cyanoamino acid metabolism
pspn00630
Glyoxylate and dicarboxylate metabolism
pspn00670
One carbon pool by folate
pspn00680
Methane metabolism
pspn01100
Metabolic pathways
pspn01110
Biosynthesis of secondary metabolites
pspn01120
Microbial metabolism in diverse environments
pspn01200
Carbon metabolism
pspn01230
Biosynthesis of amino acids
pspn01240
Biosynthesis of cofactors
pspn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pspn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L1F29_32010
09102 Energy metabolism
00680 Methane metabolism
L1F29_32010
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L1F29_32010
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
L1F29_32010
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
L1F29_32010
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
L1F29_32010
Enzymes [BR:
pspn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
L1F29_32010
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UVI29957
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Position
complement(7148240..7149487)
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AA seq
415 aa
AA seq
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MENLRKQDPELMNALNLELQRQRDNIELIASENIVSEAVLEAMGTVLTNKYAEGYPGKRY
YGGCEHVDIAEDIARNRAKELFGAEHANVQPHSGAQANMAVYLAALKPGDTVLGMNLAHG
GHLTHGSPVNASGILYNFVAYGVDENTFTINYDEVRKAAFKHRPRMIVAGASAYPRIIDF
EKLGQIANEVGALFFVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCRK
AWAQAIDKAVFPGSQGGPLMHVIAAKAVSFGEALQPSFKTYAQNVIDNAKVLSESLIEHG
LNLVSGGTDNHLMLIDLRNLNITGKDAEHVLDSVQITANKNAIPFDPTSPFITSGIRIGT
PAATSRGMGTDAMKTIAEVIAMTLKNPNDEAILAKARGMVQDLTAQYPLYPTMKY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgcgtaaacaagaccccgaattgatgaatgcactgaacctcgagctgcag
cgtcagcgcgacaatattgagctgatcgcttccgagaacatcgtttccgaagccgtgctg
gaagctatgggcaccgtgctgacgaataaatatgccgaaggctatccgggcaagcggtat
tatggcggctgcgagcacgtcgatatcgcggaagatattgcccgcaaccgcgccaaagag
ctgttcggagcagagcatgccaacgtgcagccgcattccggcgcgcaagccaatatggcc
gtttatctggcggcgctcaagcccggcgacaccgtattgggcatgaaccttgcgcatggc
ggccatttgacccacggcagccctgttaacgcatcgggtattctctataacttcgtagct
tatggcgttgacgagaacacgttcacgatcaattacgatgaagtgcgcaaagcggcgttc
aagcaccgtccccgcatgatcgtagccggcgcttccgcttacccgcgcattatcgatttt
gagaagctgggtcagattgccaatgaagtaggcgcattgttcttcgtcgacatggcacat
atcgcaggtctggtcgctgcgggtcttcatccgaatccggtgccgcatgcccatttcgtt
acgacgaccacgcacaagacgcttcgcggaccgcgcggcggcatgattctatgccgcaaa
gcttgggcgcaagcgatcgacaaggccgtattcccgggctcccaaggcggtccgttgatg
cacgtaatcgcagccaaagccgtgtcgttcggcgaggcgcttcagccatcgttcaaaacg
tatgcccagaatgtgatcgacaatgcgaaggtgttgtccgaatccttgatcgagcatggc
ctcaacctcgtatccggaggtacggataaccatctgatgctgatcgacctgcggaacctg
aacattacgggcaaggatgccgagcatgtgctggacagcgtccaaatcacggcgaacaag
aatgccattccgttcgatcctacgagtccgtttattacgagcggtatccggatcggtact
cctgctgctacgtcccgcgggatgggcacggatgccatgaagacgattgccgaggttatt
gccatgacgcttaagaatccgaacgacgaagccatcttggccaaagcgcgcggtatggtt
caggatttgacggctcaatatccgctttacccaacgatgaaatactaa
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